Gene Ava_0976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0976 
Symbol 
ID3680239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1177791 
End bp1178480 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content43% 
IMG OID637716310 
Producthypothetical protein 
Protein accessionYP_321495 
Protein GI75907199 
COG category[R] General function prediction only 
COG ID[COG1040] Predicted amidophosphoribosyltransferases 
TIGRFAM ID[TIGR00201] comF family protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0430992 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAACGT GGAATCAACG CTTTCAAGGT CTGCTTGACC TGTTTTTGCA ATCTAACTGT 
CCTCTGTGTC AAAGACCCAC ATCGACTGAA TTGTGTCCTA ACTGCACCAA ACAGTTACAA
AAATGCCGTC ACACACACCC TGATGGGTTG TGGAAACAGC CAATACCGGT ATTTAGCTGG
GGCTTGTATG GTGGTACTCT CAAACGAGCG ATCGCACTTA TGAAGTACGA CAATCAACCC
CAAATTGCCC GTCCTTTGGG ACAATGGCTA GGAGAAACTT GGTTGTTACA TTCTCTTCAT
CAAACAACAC AAATTGTAGT TGTACCAATC CCACTCCACC CCAGTAAGCA AAAACAAAGA
GGATACAATC AAGCAGCCTT AATTGCCCAA AGCTTTTGCC AAACAACTGG ACTAAAATTG
AAACTAAATG GTTTGGCGAG AGTGCGCGAG ACAACAGCGC AGTTTGGTTT ATCAGTATCT
GAACGAGAAA ATAACTTGGC TGAAGCTTTT GCGATTGGGC AAGATTTTCG CCATAGCTGC
CCAAAAACCC CAGTATTGTT AATAGATGAT ATTTACACAA CTGGTGCTAC CGTTAAATCT
GCCGTGCAGA TACTTCGTCA AAATGAAATT ACTGTCTTGG GGTTAGCAGC TACTGCCAGT
ACTGTTAAAG ATAGATACAT CAAAAATTAA
 
Protein sequence
MPTWNQRFQG LLDLFLQSNC PLCQRPTSTE LCPNCTKQLQ KCRHTHPDGL WKQPIPVFSW 
GLYGGTLKRA IALMKYDNQP QIARPLGQWL GETWLLHSLH QTTQIVVVPI PLHPSKQKQR
GYNQAALIAQ SFCQTTGLKL KLNGLARVRE TTAQFGLSVS ERENNLAEAF AIGQDFRHSC
PKTPVLLIDD IYTTGATVKS AVQILRQNEI TVLGLAATAS TVKDRYIKN