Gene Ava_0965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0965 
Symbol 
ID3680228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1167013 
End bp1168128 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content45% 
IMG OID637716299 
Productrare lipoprotein A 
Protein accessionYP_321484 
Protein GI75907188 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0797] Lipoproteins 
TIGRFAM ID[TIGR00413] rare lipoprotein A 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAAA GACATTTGTG GACTATTGTT GCCCTATCTG TAACTGTTTT GGGTACGCCC 
GCAGTCGGTC GGACTCAAAC TACTAAAGCT ACAGCACCAG CTGAGCAAAT TCTAGCTAGT
GATGTAGTCA AGGTAGGAGA GTTTCAATCA TCAGAAGGGA AAAGAACCTC GGATGCTGTG
ATTACGAGCA TTCATCCCCA TAATCTTGGA GGTCGTAGGG CGGCAACCCT ATTTATTCGG
AAAATTCCAG TTCTCACCTT TGTAAGTTCT AACCCAGTTG CCAGCGTGGA GACAAAAGTA
GGAGCAATTG GAGATACTGA GGGCGTGCAA TCGTACGCCC TTAATACTGA GAAATCAGTT
CAGGTGGCAA GTCTGGGGAA TTTAGCGGAT GCCAGAATCC AGAACCGTTC GCAAAATGAC
GATCCAGTTA AAAGAGCTAG TTTAGTAGCA GCAAAAATCA ACCAGCTCAT CAGAAATAAT
GTCAAAGCTG ACCAGATTAC CGTAAGTTGG AAGGGCGAAG ACTCTTCATT AGTTGCCTCT
CAATCTCAAA ATAAAAGTTC TTCCAATCAA CAAAAGTTAG AGCGTTATAC CATCAAATTC
AATAATCAAG AATTGGTGGA AATTAATCAA AACACAAGGC TAGCAGATTC CACCAACAAT
CTTGCTAACG ATGCGCTGCA AGCAACTAAT CGTCTGCGGA GACTTTTAGG TAATGCTTCG
CCTCTCAAAG AAATCGCTAA TTTACCAGCA CGCTCACCAA AACGTTCCTC AAACCCTATA
GCAAATCTGC CGCAGCGAAT TGCTAGCAGT ATCAGACTTA GTTTCCAAGG GATAGCTTCC
TTTTATGGAC ATGGAGATGG GTTTGCTGGC AAACCAACCG CTACTGGTGA GAGATTTAAT
CCAGAAGCCA TGACGGCTGC TCATCGTAGC TTACCTTTCG GCACAAGAGT CCGTGTTACC
AATACCCGTA ATGGTCGTTC TGTAGTGGTG CGTATCAACG ACCGGGGGCC ATTTACTCGT
GGCCGAGTGA TTGATTTATC CACAGGTGCA GCCAGACTGC TAGGAATGAT CGGTAGTGGT
GTTGCACCAG TAAGGATTGA AGTTTTGGGA AGATAG
 
Protein sequence
MNQRHLWTIV ALSVTVLGTP AVGRTQTTKA TAPAEQILAS DVVKVGEFQS SEGKRTSDAV 
ITSIHPHNLG GRRAATLFIR KIPVLTFVSS NPVASVETKV GAIGDTEGVQ SYALNTEKSV
QVASLGNLAD ARIQNRSQND DPVKRASLVA AKINQLIRNN VKADQITVSW KGEDSSLVAS
QSQNKSSSNQ QKLERYTIKF NNQELVEINQ NTRLADSTNN LANDALQATN RLRRLLGNAS
PLKEIANLPA RSPKRSSNPI ANLPQRIASS IRLSFQGIAS FYGHGDGFAG KPTATGERFN
PEAMTAAHRS LPFGTRVRVT NTRNGRSVVV RINDRGPFTR GRVIDLSTGA ARLLGMIGSG
VAPVRIEVLG R