Gene Ava_0951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0951 
Symbol 
ID3681171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1147827 
End bp1149380 
Gene Length1554 bp 
Protein Length517 aa 
Translation table11 
GC content45% 
IMG OID637716285 
ProductType III restriction enzyme, res subunit 
Protein accessionYP_321470 
Protein GI75907174 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG1061] DNA or RNA helicases of superfamily II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.12396 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCGTA CTCCCACCTT AACCTACGAT CGCGGTACAC TAATTCTGCA TCCACCACCA 
CGGGGCAAAG CCTGGATGGA TTATGCTACG TGGGATGATA GGGTAGAAAA ATTTCGGATT
CCGGCGATGA GATACCGCGC TGTGGTGGAA GCATTGCAAG CCGAAGATGT GTTTTTTGTC
GATGAAGCCA AGCAATTTTA CCCCATCGAT TTGGTTCCCA GTTTAGAAAT GGAACCCTAT
CCCCATCAGA GTGAGGCTCT AGCAGCTTGG AAACTGGCGG GAAGACAGGG GGTCGTGGTG
CTACCCACGG CGGCGGGAAA GACTTATTTG GCGCAGTTGG CGATGCAGGC CACACCACGG
ACAACCTTAA TTGTGGTGCC GACTTTAGAT TTGATGCACC AATGGTATGC TCATTTGGTG
GCGGCGTTCC CCGATGCTGA AGTGGGTTTA CTAGGGGGTG GTTCACGGGA CAAATCACCC
ATCTTGGTTG CAACTTACGA TAGTGCAGCC ATTCACGCCG AAGCCTTGGG GAATCAGTAT
GCTTTGATTG TGTTTGATGA GTGCCATCAT TTACCTACAG ATTTTAGCAA GGTGATTGCC
GAATATGCGA TCGCTCCCTA CCGTCTGGGA TTATCAGCCA CCCCAGAACG CACCGATGGT
AAACACGCCG ATTTAAATAT TCTCATTGGA CAGGAAGTTT ATCGCAAACG TGCTGAGGAT
TTGGCGGGGA AGGCGTTGGC TGAACACGAA ATTGTGCAGA TTAAAGTGAA GTTATCTCAG
CAGGAACGGG AAAGATACAA CAATTTAATT CAAATTCGCA ACGATTTCTT ACGCCAATCA
AAGGTTTCTT TGGGTAGTAT ACAAGGCTGG CAGATGTTTG TGCAGATGAG TGCGCGATCG
CAATCTGGAC GTAGAGCCAT GTTAGCCCAC CGCGAAGCTA AAGAAATCGC CTTGGGGACT
GATAGCAAGT TGAGAGTTTT AGCCAATTTA CTCACCAAGC ATTATCCAGA ACGGGTGTTA
ATTTTCACAG CTGATAATGC TACCGTTTAT AAAATATCTC AAGATTTACT GATTCCCGCC
ATCACTCATC AAACACCAGT CAAAGAACGC CACGAAATAT TAACTAAATT TCGAGAAGGT
GAATATAATA CTTTAGTTGC TTCCCATGTA TTGAATGAAG GTGTTGATGT GCCGGCTGCT
TCTATCGCCA TTATTTTATC TGGGACAGGC TCAACTAGAG AATATATTCA ACGTTTAGGT
AGGATTTTAC GTAAGGGAAA TATTCAAAAT AAACAGGCGA TTTTATATGA AGTGATAGCG
GAAGATACCA GCGAGGAAAA TACTTCTGCA CGGCGACGAG GGGAAGAAAG ACAAGGAAAT
TTGCAGGTTA TTTATGGTAG TGGTAAGGGA ACAACTGCTA AAGCTGCCGA GCAAATAGAA
ATTAATTATG TAGTCGATAA TTCATCAGCC AACAACCAGG GAAATGCTAC CAACGGAACT
CCTAAGCCAT CGCCTAAACG GCGAAGAAAT AATACCAAAA AGACTGAAGA TTGA
 
Protein sequence
MARTPTLTYD RGTLILHPPP RGKAWMDYAT WDDRVEKFRI PAMRYRAVVE ALQAEDVFFV 
DEAKQFYPID LVPSLEMEPY PHQSEALAAW KLAGRQGVVV LPTAAGKTYL AQLAMQATPR
TTLIVVPTLD LMHQWYAHLV AAFPDAEVGL LGGGSRDKSP ILVATYDSAA IHAEALGNQY
ALIVFDECHH LPTDFSKVIA EYAIAPYRLG LSATPERTDG KHADLNILIG QEVYRKRAED
LAGKALAEHE IVQIKVKLSQ QERERYNNLI QIRNDFLRQS KVSLGSIQGW QMFVQMSARS
QSGRRAMLAH REAKEIALGT DSKLRVLANL LTKHYPERVL IFTADNATVY KISQDLLIPA
ITHQTPVKER HEILTKFREG EYNTLVASHV LNEGVDVPAA SIAIILSGTG STREYIQRLG
RILRKGNIQN KQAILYEVIA EDTSEENTSA RRRGEERQGN LQVIYGSGKG TTAKAAEQIE
INYVVDNSSA NNQGNATNGT PKPSPKRRRN NTKKTED