| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0936 |
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| Symbol | sdhA |
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| ID | 3681310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 1129011 |
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| End bp | 1130747 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637716270 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_321455 |
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| Protein GI | 75907159 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTAATA TGCTAGAGCA TGATGTGATT ATTGTCGGGG GTGGGCTGGC GGGATGTCGG
GCGGCTGTGG AAATTGCCCG TACTGACCCT AGTTTAAATG TGGCGGTGGT TGCCAAAACT
CACCCCATTC GTTCCCACTC TGTTGCAGCT CAAGGTGGTA TGGCTGCATC ACTGAAGAAT
GTCGATTCTT CTGATACTTG GGAAGCTCAC GCTTTTGATA CTGTCAAAGG TTCTGATTAT
TTAGCAGACC AAGATGCTGT GGCAATTCTG ACTCAGGAAG CCCCAGATGT AGTGATAGAC
CTGGAACATA TGGGGGTTTT GTTCTCACGT CTCCCTGATG GCCGCATTGC TCAACGGGCT
TTTGGTGGAC ACTCCCACGA TCGCACCTGT TACGCAGCTG ATAAGACTGG TCACGCTATT
CTACATGAGT TGGTAAATAA TTTGCGGCGT TATGGTGTGC ATATTTATCA AGAGTGGTAC
GTGATGCGCC TGATTTTAGA AGAAAATGAG GCGAAGGGTT TAGTCATGTA CAGCCTGTTA
GACGGGCATA TTGAGGTTGT CCGGGCTAAG GCGGTGATGT TTGCCACCGG GGGTTATGGT
CGCGTTTATA ACACTACTTC TAACGATTAT GCCTCTACTG GTGATGGCTT GGCGATGAGT
GCGATCGCTG GGTTACCTCT GGAAGACATG GAGTTTGTCC AATTCCATCC CACGGGTTTG
TATCCAGTTG GTGTCTTGAT TTCCGAGGCT GTGCGGGGAG AAGGGGCGTA TTTAATTAAT
AGTGAAGGCG ATCGCTTTAT GGCGACTTAT GCACCCAGTC GTATGGAACT AGCACCCCGC
GATATTACCT CACGGGCGAT CGCTTATGAA ATTCGGGCTG GACGTGGTGT CAATTTGGAT
GGCAGCCCTG GTGGCCCCTT TGTCTATCTG GATTTACGCC ACATGGGCAA GGAAAAAATT
ATGAGTCGCG TCCCCTTCTG TTGGGAAGAA GCCCACCGCC TAGTCGGTGT GGATGCAGTC
ACTCAACCAA TGCCAGTCCG GCCGACAATT CACTATTGTA TGGGTGGTAT CCCTGTAAAT
ACCGATGGTA GAGTCCGCAG CAGTGGCGAT GGCCTGGTTG AAGGGTTTTT TGCGGCTGGT
GAAACATCTT GTGTATCTGT CCACGGGGCA AATCGTCTCG GTAGTAATTC TTTATTAGAA
TGTGTAGTTT ATGGTAAACG AACTGGGGCG GCGATCGCTC AATATGTACA GAACCGTAAA
TTACCTGCCA TAGATGAACA ACGTTACGTC AAACAAGCCC AGCAAGAAAT TCAAGCTTTA
CTGGAACAGC CAGGAGAGTA TCGAATCAAT CAAGTCCGTC AAGCTTTTCA AGACGCAATG
ACAGATTACT GTGGCGTTTT CCGCACTCAA GATTTAATGA GTCAAGGTTG GCAAAAAATC
ACAGAAATAC AACAAAAATA CAGTCAAATA TACTTAGATG ATAAAGGCAG TTGTTGGAAT
ACTGAACTAG TAGAAGCTTT AGAGTTGCGG AGTTTAATGA TAGTCGGACA GATGATTTTA
GCCTCAGCTT TAAATCGTCA AGAAAGTCGT GGCGCACACT TCCGCGAAGA TTACCCACAG
CGAGATGATA CCAAGTTCCT GCAACACACA ATGGCTTACT ATTCACCTGC GGGGATTGAC
ATTCAATATC GCCCAGTGAC AATTACCATG TTTCAGCCAC AGGAGAGGAA GTATTAG
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| Protein sequence | MVNMLEHDVI IVGGGLAGCR AAVEIARTDP SLNVAVVAKT HPIRSHSVAA QGGMAASLKN
VDSSDTWEAH AFDTVKGSDY LADQDAVAIL TQEAPDVVID LEHMGVLFSR LPDGRIAQRA
FGGHSHDRTC YAADKTGHAI LHELVNNLRR YGVHIYQEWY VMRLILEENE AKGLVMYSLL
DGHIEVVRAK AVMFATGGYG RVYNTTSNDY ASTGDGLAMS AIAGLPLEDM EFVQFHPTGL
YPVGVLISEA VRGEGAYLIN SEGDRFMATY APSRMELAPR DITSRAIAYE IRAGRGVNLD
GSPGGPFVYL DLRHMGKEKI MSRVPFCWEE AHRLVGVDAV TQPMPVRPTI HYCMGGIPVN
TDGRVRSSGD GLVEGFFAAG ETSCVSVHGA NRLGSNSLLE CVVYGKRTGA AIAQYVQNRK
LPAIDEQRYV KQAQQEIQAL LEQPGEYRIN QVRQAFQDAM TDYCGVFRTQ DLMSQGWQKI
TEIQQKYSQI YLDDKGSCWN TELVEALELR SLMIVGQMIL ASALNRQESR GAHFREDYPQ
RDDTKFLQHT MAYYSPAGID IQYRPVTITM FQPQERKY
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