Gene Ava_0922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0922 
Symbol 
ID3681355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1116346 
End bp1117269 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content36% 
IMG OID637716256 
Producthypothetical protein 
Protein accessionYP_321441 
Protein GI75907145 
COG category[S] Function unknown 
COG ID[COG3781] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTTG AGAGAAAACG CTGGTTTCAA ATAGCTTTTC AACTTAGAGG CTCAGTTATT 
GGCGCAATTT ACAAACGCGT TATTTGCTGC GCTTTATTCG GGGTATTAGT TACTTTACTT
TATCAACTAA AAATTCCTGT ATCCCAACCA ATTTTAGGTA GTGTTATTCC TAGTATTGTT
TTAGGTTTAT TACTAGTGTT TCGGACAAAC ACTGCTTATG AACGTTTTTG GGAAGGTAGG
AAAGCCTGGG GGTCTATAGT CAACAACACG CGTAATTTGG CTAGACAAAT TTGGGTATCT
GTGGATGAAA TTTCACCAAA GGATAGAGAA GCTAAAATAT CAGTTTTGAA CTTATTAGTC
GCTTTTGCTG TGGCTACTAA ATTGCATTTG CGCGGAGAAC CTATAAATAG TGAACTTGAA
GACTTAATCT CCACTTCTCG ATATTTCAAA CTTAAGAGTA TGAATAATCC GCCGTTAGAA
GTAGCCTTCT GGATTGGAGA TTATTTACAA CAGCAATATA CTCGCAAGTG CTTAAACACT
TATCAATTAA CATCTATACA AGAACTATTA AACAATTTGG TTGATAATCT AGGGTCTTGT
GAACGGATTC TCCGAACACC GATGCCTTTA GCTTATTCTA TTCATCTTAA GCAATTATTA
TTATTATATT GTTTTCTCTT ACCTTTTCAA ATGGTAGAGA GTTTGGGTTG GTGGACAGGT
TTAGTTGTGG GGTTAGTGAG TTTTACTTTA TTTGGCATTG AAGCGATCGG TTTAGAGATT
GAAAATCCTT TTGGTTATGA TCCTAACGAT TTACCATTAG ATGCCATCTG TAACACAATG
AAGCGAAATA TTGATGATTT AACTAGTTTA TCTCCCAATG TGCGTTCTCA TGATCTGGGT
GAAACTTCAA ATGTCATAAT ATAA
 
Protein sequence
MTVERKRWFQ IAFQLRGSVI GAIYKRVICC ALFGVLVTLL YQLKIPVSQP ILGSVIPSIV 
LGLLLVFRTN TAYERFWEGR KAWGSIVNNT RNLARQIWVS VDEISPKDRE AKISVLNLLV
AFAVATKLHL RGEPINSELE DLISTSRYFK LKSMNNPPLE VAFWIGDYLQ QQYTRKCLNT
YQLTSIQELL NNLVDNLGSC ERILRTPMPL AYSIHLKQLL LLYCFLLPFQ MVESLGWWTG
LVVGLVSFTL FGIEAIGLEI ENPFGYDPND LPLDAICNTM KRNIDDLTSL SPNVRSHDLG
ETSNVII