Gene Ava_0918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0918 
Symbol 
ID3681351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1111243 
End bp1112244 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content43% 
IMG OID637716252 
Productheat shock protein DnaJ-like 
Protein accessionYP_321437 
Protein GI75907141 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.555506 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATGC AGAATTTGCA GAATTTTCGT GATTATTACG AGATTTTGGG AGTAACGAAA 
GATGCTACGA ATGAAGATAT TAAAAAGAAT TATCGACGGT TAGCAAGACA GTATCACCCT
GATCTCAATC CGGGGAATAA AGACGCAGAA GAAAAGTTTA AAATCATCGG CGAAGCTTAT
GAAATGCTTT CCGATGCGAC TAAACGCGCA CAATATGACC AGTTTAGCCG TTATTGGAAA
CAGAAAGGCT TTCCTAAACA AACTCCTAAA TCCAAGGCTT GGGGAGATAG TCGTAATGGA
GAACGCAACG GTAACGAAAA TGTAGATCCC AGCCAGTTTA CCAATTTTGA AGACTTTCTC
AATCAAGTTA TCGGTGTTGG CAGTCGTAGA GATAGTAAAA ATGGTGCAAG TACCAACACG
ACAACCGATC CGTTTCGTTC GCCAAAAAGC CGAGTTGAAT ATACAGTTCC CAAAAATCCC
GCCCGTCCAG CCCGTCGGGA TATTGAAGCA AGATTGACCT TACCCTTTGA AAAAGCTTAT
TCTGGGGGTA ATGAACGTAT TCGTTTAGAA GATGGGCGAT CGCTAGAAGT GACAATGCCC
CCAGGGATGG TAACCGGTCA AACCATCCGC CTGCGTAATC AAGGCATAAG CGGCGGCGAC
CTTTACTTAA AAATTACTGT CGAACCTCAC CCATTATTTA AACTGGAAGG TACTAATATA
TTCTGCCAAG TACCAGTCAC TCCCAGCGAA GCTGTCTTAG GAGGACAGGT AGAAGCACCA
ACCCTAGATG GTCCCGTGAA AATGACCATT CCCCCAGGAG TTAGGTCTGG TCAAAGATTC
CGCCTAGCCA ATAAAGGCTA CCCCAGCGAT AACGGTAAAC GCGGTGATCA ATTAGTAGAA
ATTCAAATAC TTACCCCAAA AACTATCAGT CAAGAAGAAC GAGAACTTTA CGAAAAACTC
CGGCAAATTG AAACATTTAA ACCCCGCGCT GATTTAATTT AA
 
Protein sequence
MNMQNLQNFR DYYEILGVTK DATNEDIKKN YRRLARQYHP DLNPGNKDAE EKFKIIGEAY 
EMLSDATKRA QYDQFSRYWK QKGFPKQTPK SKAWGDSRNG ERNGNENVDP SQFTNFEDFL
NQVIGVGSRR DSKNGASTNT TTDPFRSPKS RVEYTVPKNP ARPARRDIEA RLTLPFEKAY
SGGNERIRLE DGRSLEVTMP PGMVTGQTIR LRNQGISGGD LYLKITVEPH PLFKLEGTNI
FCQVPVTPSE AVLGGQVEAP TLDGPVKMTI PPGVRSGQRF RLANKGYPSD NGKRGDQLVE
IQILTPKTIS QEERELYEKL RQIETFKPRA DLI