Gene Ava_0885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0885 
Symbol 
ID3681571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1081570 
End bp1082124 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content42% 
IMG OID637716219 
Producttripartite ATP-independent periplasmic transporter DctQ 
Protein accessionYP_321404 
Protein GI75907108 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.27189e-07 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
TTGGAAAAAC TGTTAAAAAT ATCGAGAATA ATTGATGCCT TTACAGAACG CGTAGGTCGA 
TATACCAGTT GGTTGGTATT AGTCATGGTC ATACTAGGCG TGTGGAATGT TGTCGGGCGA
TATTTAGGGC GCATTAGCGG TAACAACCTC ACATCCAACG CTTATATAGA AGCTCAGTGG
TATATTTTCG ATGTAATTTT TTTCTTAGGG GCAGCTTATA CCCTGAAGCA TAACGAACAC
GTCCGCGTTG ATATTTTTTA TAGTAATTGG CAACGTCGGC GTAAAGCGAT CGCAGACTTT
CTCGGAACCA TATTTTTTCT CATTCCCTTC AGCATCATAG TGATTTTTGT TTCTTGGGAT
ACTATCGTCG CATCATGGCA GATTGGTGAA TTATCGCCCG ATCCTGGTGG GTTGCCCCGC
TACCCCATTA AAGCCATGAT TATCGTTGGC TTTGTGTTGT TAATTATTCA AGGAATTTCC
CAAGCAATTA AAAACTTAGC AATTATCCAA GGCAGACTAG AACCCCAGGA GGAAAATCAT
GACGCTGGCT TATGA
 
Protein sequence
MEKLLKISRI IDAFTERVGR YTSWLVLVMV ILGVWNVVGR YLGRISGNNL TSNAYIEAQW 
YIFDVIFFLG AAYTLKHNEH VRVDIFYSNW QRRRKAIADF LGTIFFLIPF SIIVIFVSWD
TIVASWQIGE LSPDPGGLPR YPIKAMIIVG FVLLIIQGIS QAIKNLAIIQ GRLEPQEENH
DAGL