| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0883 |
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| Symbol | |
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| ID | 3681745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 1078916 |
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| End bp | 1080010 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637716217 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_321402 |
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| Protein GI | 75907106 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.550638 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000307081 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACGCC GAGAAGTTTT GAATACTGCT GCGATCGCCA CAGCAACTAC AGCTTTAGTT
TCCTGTACCA AAACTAGTAC ATCTTCTGTG CAAGCAGGAT TACCAAATGT GCGCTGGCGG
ATGACGACTA GCTGGCCTAA GTCTTTAGGG ACTTTTATTG GTGCAGAAAC CGTTGCCAAA
AGAGTAGCAG AAATGACCAA TGGGCGTTTC AAAATTACAC CATTTGCGGC GGGGGAATTA
GTACCAGGCT TGCAAGTTCT CGATGCTGTA CAAGCTGGAA CTGTAGAATG CGGTCATACA
TCTAGTTACT ATTACATCGG TAAAAGTCCA GCTTTAGCTT TCGCCACCTC TGTACCCTTC
GGTTTAAATG CCCAACAACA GTATGCTTGG CTTTACCAAG GTGGTGGACT AGCGGCTATC
CAAAAAATTT ATGCTAATTT CAACGTTATT AATTTTCCGG CTGGTAGTAC CGGCGCACAG
ATGGGGGGAT GGTTCAAAAA AGAAATTAAA TCTGTGTCTG ATCTCAAAGG TTTGAAAATG
CGGATTCCTG GTTTAGGCGG ACAAGTCATG TCCCGTTTAG GTGTAAATGT GCAAGTATTA
CCAGGAGGCG AAATTTATTT AGCTTTAGAC AGAGGTGCAA TTGATGCAGC CGAGTGGGTA
GGCCCCTATG ATGACGAGAA ACTAGGTCTG AATAAAGCTG CCCAATTTTA CTATTATCCT
GGTTGGTGGG AACCAGGCCC AACTTTGGAT GTATTAGTTA ACCTGAATGC TTGGAATCGT
CTACCAAAGG AATATCAGGA AGTATTCAAA ACGGCGACTG TAGAAGCTAA CTTAACAATG
CTCAATCAAT ATGATGCTTT AAACGGAGAA GCACTTTCCA GGTTACTAGC AAGTGGGACA
AAGCTCGTTC CCTACAGTCC AGAAATTATG CAGGCATCTC AGAAAATTTC TTTTGATATT
TTTGAAGAAA ATGCTAGTAA GGATGCAGCT TTCAAACAAG TTTACGAACA GTGGAAAGCC
TTCCGTAAGC AGATTTTCGC CTGGAATCGG GTTAATGAAT TGAGCTATGA AAATTTTGCT
AGTTCTAGTC AATAG
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| Protein sequence | MKRREVLNTA AIATATTALV SCTKTSTSSV QAGLPNVRWR MTTSWPKSLG TFIGAETVAK
RVAEMTNGRF KITPFAAGEL VPGLQVLDAV QAGTVECGHT SSYYYIGKSP ALAFATSVPF
GLNAQQQYAW LYQGGGLAAI QKIYANFNVI NFPAGSTGAQ MGGWFKKEIK SVSDLKGLKM
RIPGLGGQVM SRLGVNVQVL PGGEIYLALD RGAIDAAEWV GPYDDEKLGL NKAAQFYYYP
GWWEPGPTLD VLVNLNAWNR LPKEYQEVFK TATVEANLTM LNQYDALNGE ALSRLLASGT
KLVPYSPEIM QASQKISFDI FEENASKDAA FKQVYEQWKA FRKQIFAWNR VNELSYENFA
SSSQ
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