| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0878 |
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| Symbol | |
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| ID | 3681740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 1073740 |
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| End bp | 1075077 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637716212 |
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| Product | arsenical pump membrane protein |
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| Protein accession | YP_321397 |
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| Protein GI | 75907101 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1055] Na+/H+ antiporter NhaD and related arsenite permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.201371 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000139145 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGAAAACT GGCAAGCACT CCTAAGTGTC ATCGTATTTA TCAGCGTCAT TTTTCTCATT
ATGACGGAAT GGGTGCATTT GACTATTGCA GCCTTATTAG GAGCATTATT ATTAGTATTT
ACTAATGTGA TGACTTTACA AGAAGCTGTT GCTTACATCG GTAATAGTCA TGGCACACTG
GGATTATTTT TTGGGGTAAT GGTTTTAGTT AGAGCATTTG AGCCTACTAA AATATTTGAT
TATCTAGCAA CCCAAATAGT GATATTAGCT AAAGGCGATG GTAAGCGTCT TTTACTCGGT
ATTGTTGCCA TTGTCACTCC CATTTGTGCA GTGTTACCAA ATGCAACAAC AGTGATGTTG
TTAGCGCCAC TAATTCCACC AATGGCACAA GAAATAGGGA TAAATTTTGT ACCTTTATTG
ATATTGATGG TTTTGATTGC CAATAGCGCT GGATTGCTGA CATTAGTAGG CGACCCAGCG
ACATTTATTG TGGGTGATGC TGTCAATATA AGTTTTATAG ATTATCTATG GAAACTTAGT
TTAGGTGGTG TGATTGCAGT CGCTATGGTG ACTCTTACTT TGCCATTGTT ATTTCGCAAA
ATTTGGTATA CAAAATTAGA GAATCTAGAA GAATTACCAC ACCCAGAAAT TAATCATCCA
CGAGTTTTGA GTGTGGGTGC AGTAATTGTC GCTTTTGTCC TACTATTTTT TGTGATTGGA
GAATCTTTGC CAATACCGAT TTCTCCGGCG GCTGTGGCTT TGTTAGGTGC AGCGTTGGCT
TTACTACTAT CTCACCATAG CAAAATTGAT ACAGTCAACA ATATTTTACG TGACGTAGAC
TGGAGTACAT TAATATTCTT TATGAGTATT TTTGTACTGA TTGGCGGGTT AGAAAAAACA
GGTGTAATTG GTGGTTTATC AGGGATATTG GCGACTATTT TAGGAAAAAA TATTCTCTTG
GGTTCTCTGG TATTGTTGTT TCTTGTAGGA ATACTATCGA GTGTCGTACC TAATATTCCC
TTGGTAGTGG CGATGGTTCC CCTACTTAAG CAATACATTG TCACTGTAGG ATTAGCACCC
GCAGAAGTTT TAGCAAGAGA CTTTCAAGGA CAATTTCCCC CAGAAGTTTT ACCACTGTTT
TACGCCATGA TGTTTGGTGC AACCTTAGGC GGAAATGGTA CCTTAGTCGG TGCATCGTCT
AACATCGTGG CGGCGGGAAT TTCCGAACAG CACGGACGAC GCATTTCTTT TAAAACTTTT
CTTCACTATG GTATTCCAGT CACAATCTTA CAACTAATGG CCTCAGCATT GTATGTATTA
ATCCGGTTTC TGATTTAG
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| Protein sequence | MENWQALLSV IVFISVIFLI MTEWVHLTIA ALLGALLLVF TNVMTLQEAV AYIGNSHGTL
GLFFGVMVLV RAFEPTKIFD YLATQIVILA KGDGKRLLLG IVAIVTPICA VLPNATTVML
LAPLIPPMAQ EIGINFVPLL ILMVLIANSA GLLTLVGDPA TFIVGDAVNI SFIDYLWKLS
LGGVIAVAMV TLTLPLLFRK IWYTKLENLE ELPHPEINHP RVLSVGAVIV AFVLLFFVIG
ESLPIPISPA AVALLGAALA LLLSHHSKID TVNNILRDVD WSTLIFFMSI FVLIGGLEKT
GVIGGLSGIL ATILGKNILL GSLVLLFLVG ILSSVVPNIP LVVAMVPLLK QYIVTVGLAP
AEVLARDFQG QFPPEVLPLF YAMMFGATLG GNGTLVGASS NIVAAGISEQ HGRRISFKTF
LHYGIPVTIL QLMASALYVL IRFLI
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