| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0871 |
|---|
| Symbol | |
|---|
| ID | 3681733 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 1064881 |
|---|
| End bp | 1066419 |
|---|
| Gene Length | 1539 bp |
|---|
| Protein Length | 512 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637716205 |
|---|
| Product | amine oxidase |
|---|
| Protein accession | YP_321390 |
|---|
| Protein GI | 75907094 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
|---|
| TIGRFAM ID | [TIGR02730] carotene isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.598168 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0715769 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCAAA CAGATGTAGT AGTTATTGGT AGCGGCGTTG GGGGGTTGAG TTGTGCTGCG
TTGCTGGCAC GTTATGGGTT TGATGTGACT GTTTGTGAGA GTCATTCGAT TCCTGGTGGG
GCGGCGCACG GTTTTGAACG TCAAGGATTT AAGTTTGATT CGGGGCCTTC TCTTTACTCT
GGGTTGTCTT ATAGTCCTTC GGTTAACCCT TTACGGCAGG TGCTAGATGC AGTTGGTGTT
GATTTGCCCT GCGTCACTTA TGATACTTGG GGCTGTTGCT TACCTGAAGG TGATTTTGAT
GCTGCGGTGG GTGCAGAACA ATTTTGTGAA GTGCTGGGGA GACTGCGGGG AGAGGCGGCG
GTGGCTGAAT GGCGGCGGTT GCAACAGGTG ATGACACCAC TAGCCCAGGC GGCGATCGCT
CTCCCCCCAG CTGCATTACG CTGGGATATA GGCGCAGCTC TCACTATTGG CCGATTTGCT
CCCACTCTGG CTAAACAATC TGCAAATTTT TTCAAGTTAA CAGGGCCTTT CTCTCGCATT
ATGGATGGGG TTGTTCATGA CCCTTTTATT AGTAACTGGC TGAATTTACT GTGTTTCCTC
CTCTCTGGAC TCCCAGCGTC GGGAACCAAT GCGGCAGAGG TAGCATTCAT GTTCGCTGAT
TGGTATCGCC CAGGAGTAGC TTTAGATTAC CCCATTGGTG GTAGTGGTGC TTTAGTTAAT
GCTTTGGTAG AGGGATTTAA AAAACACGGT GGGGAATTGC TACTTCATAC CCATGTTGAA
CAAGTATTAG TAGAAGGTAA CAAAGCGGCG GGTGTCAGGT TGGGAGATGG GCAAGAAATT
CGGGCGCGGC GGGCGGTCGT GTCTAATGCT TCGGTGTGGG ATACGCTGAA GTTATTACCG
GAGGGGGCTG TATCTCAAAA ATTCCGCAGC CAACGCCAAG CCACACCCGA ATGTGATAGT
TTTATGCACC TGCATCTGGG TATTAATGCC CAAGGTTTAC CCCCAGATTT GGCTTGTCAT
TATATTGTGG TGAATGATTG GGAATTGGAG ATTACTGCAC CCCAGAATGT TATTTTGGTA
TCGATTCCCT CAATTCTTGA CCCGTCTTTA GCACCACAGG GTAAACACGT AATTCATGTA
TATACCCCTG GTAATGAACC TTACACACTG TGGCAAGGGA TGGACAGGAG AAGTCAAGAA
TATGAACAAC AAAAGCGATC GCGTGCCGAA GTGATGTGGC AAGCTGTAGA ACGTATCATT
CCTGATATTC GCTCTCGTTG TGAAATCCAA TTGGTAGGTA CACCCCTGAC CCATGAGAGA
TTTTTACGCC GCTATCGTGG TTCCTACGGC CCCGCAATTT CCGCCGCCTC TGGTTTGTTT
CCTGGTCATG GTACACCCCT TCCAGGGTTG ATGTGCTGTG GTGATTCCAC ATTTCCCGGT
ATCGGTCTGC CAGCCGTCGC CGCTAGTGGG ATGATTGTGG CTAATACCCT AGCTCCAGTC
AGTCAGCATT TGGCGATGCT GGACAGAGTT GGCCTTTAA
|
|---|
| Protein sequence | MKQTDVVVIG SGVGGLSCAA LLARYGFDVT VCESHSIPGG AAHGFERQGF KFDSGPSLYS
GLSYSPSVNP LRQVLDAVGV DLPCVTYDTW GCCLPEGDFD AAVGAEQFCE VLGRLRGEAA
VAEWRRLQQV MTPLAQAAIA LPPAALRWDI GAALTIGRFA PTLAKQSANF FKLTGPFSRI
MDGVVHDPFI SNWLNLLCFL LSGLPASGTN AAEVAFMFAD WYRPGVALDY PIGGSGALVN
ALVEGFKKHG GELLLHTHVE QVLVEGNKAA GVRLGDGQEI RARRAVVSNA SVWDTLKLLP
EGAVSQKFRS QRQATPECDS FMHLHLGINA QGLPPDLACH YIVVNDWELE ITAPQNVILV
SIPSILDPSL APQGKHVIHV YTPGNEPYTL WQGMDRRSQE YEQQKRSRAE VMWQAVERII
PDIRSRCEIQ LVGTPLTHER FLRRYRGSYG PAISAASGLF PGHGTPLPGL MCCGDSTFPG
IGLPAVAASG MIVANTLAPV SQHLAMLDRV GL
|
|---|
| |