Gene Ava_0859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0859 
Symbol 
ID3681760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1051847 
End bp1052629 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content41% 
IMG OID637716193 
Producthypothetical protein 
Protein accessionYP_321378 
Protein GI75907082 
COG category[R] General function prediction only 
COG ID[COG3694] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.487071 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.1891 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAGAT ACTTGAAAGT ACTAAAACTA TTTTGGAGTG CAGCGATCGC TGCTGAGATA 
GAATATCGTA TAAACTTCTT TATCGCTACC CTCAGTAGTA TAGGAAATTT AGCAGGCAGC
CTGTTTGGAC TATTCTTGTT TTACCGCAAT GGCTATACTT TTAGTGGCTG GTCATGGGAA
GCAGCTTTAG TAGTGTTGGG AATTTTTACT TTACTGCAAG GCTTTTCTGC TACTTTTCTC
GCTCCCAATC TCAACCGTAT TGTTCGCCAT GTCCAAGAAG GGACTTTAGA TTTTGTTCTG
CTCAAACCTA TACGTAGTCA GTTTTGGCTT TCCACCCACA CCATATCCCC TTGGGGAGTA
CCAGATTTAA TTTTTGGTGG AGTGATTATT GGCTATGCCG GTAAACGCCT TGGCTTGGGA
ATTACTAACT ATCTACCAAG CATTATCCCC TTGTTTTGTG GCTTGATAAT TCTTTACAGT
CTTTGGTTTA TACTAGGTGC AACTAGCATT TGGTTTATAA AAATATATAA TGCTACTGAG
GTGTTACGGG GGTTGTTAGA GGCGGGTCGA TATCCGATGG TGGCTTATCC TGCGGCTTAT
CGCTTTTTCT TTACTTTTAT CGTTCCAGTA ACATTTTTAA CCACAGTGCC AGCCGAAGTC
ATATTAGGTA GAGTAGAAAT TCCTTGGTTA ATAGGTGCAT TAGTCTTGGC TACGGTGCTT
TTTTGGGCTT CCAGCAAGTT TTGGAGTTTT GCTTTGCGAT TTTATACCAG CGCTTCGAGT
TAG
 
Protein sequence
MQRYLKVLKL FWSAAIAAEI EYRINFFIAT LSSIGNLAGS LFGLFLFYRN GYTFSGWSWE 
AALVVLGIFT LLQGFSATFL APNLNRIVRH VQEGTLDFVL LKPIRSQFWL STHTISPWGV
PDLIFGGVII GYAGKRLGLG ITNYLPSIIP LFCGLIILYS LWFILGATSI WFIKIYNATE
VLRGLLEAGR YPMVAYPAAY RFFFTFIVPV TFLTTVPAEV ILGRVEIPWL IGALVLATVL
FWASSKFWSF ALRFYTSASS