Gene Ava_0845 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0845 
Symbol 
ID3681863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1030561 
End bp1031691 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content34% 
IMG OID637716179 
Productpolysaccharide pyruvyl transferase 
Protein accessionYP_321364 
Protein GI75907068 
COG category[M] Cell wall/membrane/envelope biogenesis
[G] Carbohydrate transport and metabolism 
COG ID[COG5039] Exopolysaccharide biosynthesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.355867 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00186143 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGATACAAG TCCTTAATCT CACAACACCA GAAACTATCA AAAATTACTT ACATGAAGCT 
TTAGGTAAAA TAGAGCCTTT TGAACAATGT ATTCTTCTAG ATTATCCTGA CCATGCAAAC
ATTGGTGACA ACTTAATTTG GCTGGGAGAA TTGCTTTATT TGCACAACAC TCGCCAGTCC
CAAATTACTT ATAATGCCAG TGTTGAAAAT TTCTCAGTCC AAGAAATGGA TAAATGCAAA
TCTTCATGTG AAATTCCCAT TTTTTTACAT GGAGGAGGAA ATCTGGGTGA TTTATGGCTA
AAGTTTCAGA ATTTTAGAGA GTATATTATA TCTGAATACA AAGAAAACCC AATTATCATT
TTCCCCCAAA GTATTTATTT CCAAGAAGAA GATAATTTAA TCAAGGCTGC TCGTATCTTC
AATTCACACC CAAACTTAAC TATATTTGTT CGGGATAACT ACAGTTATCA GTTAGCAACA
AATTATTTCT CTAATTGTCG GATTATTAAA TCCCCTGATG CAGCGTTTCA ATTAGTTAAC
ACTCCAGGGA TAGCTGCTGC ATATCAAAAT AAAAGTTCTA TTCTTTATCA TTTTAGAAAC
GATAAAGAAT TAAATTTAAA TCAAGCTGGT TCTCCTCATA CCCTCGACTT GCCAAATTTA
ATAGTAGAAG ATTGGGCTTC TTATAAATAT GAGAGTGACT CTTACAAAGA GTTACCACAT
AATGCTGTAA TTCAAAGTTT CGCCAGAGTC TTCCACGGTT GGGAACAAGG CAAATTATTT
CCTGATGAAT GGATTACTCG TCAAATCTGG AAATATTTCC ATCCCTATAC TACTGCTTTT
TCTCAATCTT ATAACCCTGA ATCACATCGC AAAGCTTGGA GTTATATGTA TCAGGGAGTT
TACCAGTTCA AACAACATCG ATTAATTATT ACAAATAGGC TACATGGTCA TATTCTTTCT
ACTTTGATGG GAATTCCCCA TATTTTTCTC CCTAATTCCT ACCACAAAAA TGAAGCTTTT
TATGAGGCTT GGACATATCA AATCCCCTTT TGTCGTTTTG TCAAAGATCC TGAAAAAATA
GCCGATACAG TTCGGGAATT GATTGAGATT TCTGAAATTG CTAAAAACTA A
 
Protein sequence
MIQVLNLTTP ETIKNYLHEA LGKIEPFEQC ILLDYPDHAN IGDNLIWLGE LLYLHNTRQS 
QITYNASVEN FSVQEMDKCK SSCEIPIFLH GGGNLGDLWL KFQNFREYII SEYKENPIII
FPQSIYFQEE DNLIKAARIF NSHPNLTIFV RDNYSYQLAT NYFSNCRIIK SPDAAFQLVN
TPGIAAAYQN KSSILYHFRN DKELNLNQAG SPHTLDLPNL IVEDWASYKY ESDSYKELPH
NAVIQSFARV FHGWEQGKLF PDEWITRQIW KYFHPYTTAF SQSYNPESHR KAWSYMYQGV
YQFKQHRLII TNRLHGHILS TLMGIPHIFL PNSYHKNEAF YEAWTYQIPF CRFVKDPEKI
ADTVRELIEI SEIAKN