Gene Ava_0844 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0844 
Symbol 
ID3681862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1029574 
End bp1030518 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content35% 
IMG OID637716178 
Productglycosyl transferase family protein 
Protein accessionYP_321363 
Protein GI75907067 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0881511 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00160187 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGCCAATAA TATCTGTAAT CATTCCTGTA TACAATGGTG AAAAAACAAT TATTGAAACC 
ATTGCTTCCG TTCAACAGCA AACCTTCCTA GATATTGAAA TCATTGTGAT CAATGATGGC
TCAACAGATA AGACTCTTGA GCTTGTGAAA AATATTCCAG ATAATCGCTT GAAAATCTTT
TCTTATGAAA ATGGTGGTTT ACCCGTAGCT CGTAATCGCG GTATTACCCA CGCTGTAGGT
CAATTTATTG CTTTCATTGA TGCTGATGAT CTTTGGACAC CAGATAAGCT AGAACTTCAG
TTTGCTGCAT TACAAGAATA TCCAGAAGCA GGATTAGCTT ATAGTTGGAC TTATTATAAA
TTTGCAAATG AAGCAGATTC TTATGCTGAC GAATCTAATT CATTTGTAGG TGATGTTTAT
GCTGAACTGC TAGTCAAGAA TTTTTTGCAG AACGGTTCCA ATCCTCTAAT TCGGCGAGCA
GCTATTGACT CTGTAGGACT TTTTGATCCG ACTTTGAAAT CTTGCGAAGA TTGGGATTTT
TACCTACGGT TAGCGGCTAA ATGGCAGTTT GCTTTAGTTA AAAAAGCACA AATTATCTAT
CGTCAGTCCC CAACTGCTAT GACATCTAAA TTAGATGTTA TGGAAAAGTA TAGTTCTGTT
GTCATAGAGA GAGCTTTTAA TACAGCTCCT CCAGAATTAC AACATCTAAA AAAACAAAGT
CTAGCATGGG TTTACAAATT TACGGCTCAA CAATGTTTGA AATATAACAG TGATAAACTC
GCTGATATTA AACTAGCCGC TAAAAGATTA AAAATGGCTA TTACTCTCTA TCCAAAAAAC
CTTTTAGAAG ACTACACTCA TGGTCTCATA AGAAAACTTA TTAAAAGTTG GATATTATTA
CAATTTCACA TGGTTGATAT TCCTGAAAAA TCTCACAATA CTTAA
 
Protein sequence
MPIISVIIPV YNGEKTIIET IASVQQQTFL DIEIIVINDG STDKTLELVK NIPDNRLKIF 
SYENGGLPVA RNRGITHAVG QFIAFIDADD LWTPDKLELQ FAALQEYPEA GLAYSWTYYK
FANEADSYAD ESNSFVGDVY AELLVKNFLQ NGSNPLIRRA AIDSVGLFDP TLKSCEDWDF
YLRLAAKWQF ALVKKAQIIY RQSPTAMTSK LDVMEKYSSV VIERAFNTAP PELQHLKKQS
LAWVYKFTAQ QCLKYNSDKL ADIKLAAKRL KMAITLYPKN LLEDYTHGLI RKLIKSWILL
QFHMVDIPEK SHNT