| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0840 |
|---|
| Symbol | |
|---|
| ID | 3681858 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 1025182 |
|---|
| End bp | 1026138 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637716174 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_321359 |
|---|
| Protein GI | 75907063 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0249486 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAAAG TATCAGTTGT TATTCCTGCT TATAATGCGA TGAAATACCT CCCCGCCACA
GTGGAGAGTG TCTTACAACA AACATTTACT GATATAGAAA TTTTAATTAT TAATGATGGG
AGTTCAGATA ATATTATTGC CTGGACTACA CAAATCACAG ACCCACGAGT GCAAGTGATT
TCCCAACAAA ATCAAGGCTT ATCGGGAGCG CGTAACACAG GTATTAATCA CGCATCTGGA
GAATATATAG CCTTTATCGA TGCTGATGAT TTATGGCTAC CAAGTAAATT AGAAAAGCAA
GTGAAATGTT TAGATAATTC TCCACAAGCT GGTTTAGTTT ATACATGGAC AGCTTGGACT
GATGAAACTG GTAAACCTAC AGGTGTGATA GTCGCTTCCG ATGTCGAAGG GTACGTCTGG
GAACAAATGG TTGTCAATGA CAAAATATCT AACGGTAGTT CGGCGATGGT GCGTCGTATT
TGTTTTGACA AAGTAGGCTT ATTTGACACA GAATTGACCA GTTCGGAAGA CCGCGATATG
TGGATTAGAC TGGCGGCTCA TTATCACTTT GCGGTTGTCA AGGAACCCCT CACACTCTAC
CGCCGACATT CACAAAGTAT GAGCAAAAAT CGTCCGAAGA TGCTCAAAAA TATCCGCCGA
GTTTTTGAAA AAACCTTTGA GACTGTCCCA ACAGAACTAC TATACTTGCG AAACCGGAGC
TACGGGTGGA TAAATTTGTA TACAGCTTGG ACTTGTATGG ATGAAAAGAA TCACCAGGAA
GCAATCAAAT ATCGTCGCCA AGCTCTTTTA CATTACCCAC AGATTTTTTT CACAGCCTAT
TTCTTACGTT TGAGTGTAGC TATTGTGATT ATGCAGTTAT TAGGCTCTCA AGGCTATGAT
AACCTGCGAT CGCTCATTCG TAACTTGCGT AGATTGGTTT TAGGCGCTGC AACCTAA
|
|---|
| Protein sequence | MPKVSVVIPA YNAMKYLPAT VESVLQQTFT DIEILIINDG SSDNIIAWTT QITDPRVQVI
SQQNQGLSGA RNTGINHASG EYIAFIDADD LWLPSKLEKQ VKCLDNSPQA GLVYTWTAWT
DETGKPTGVI VASDVEGYVW EQMVVNDKIS NGSSAMVRRI CFDKVGLFDT ELTSSEDRDM
WIRLAAHYHF AVVKEPLTLY RRHSQSMSKN RPKMLKNIRR VFEKTFETVP TELLYLRNRS
YGWINLYTAW TCMDEKNHQE AIKYRRQALL HYPQIFFTAY FLRLSVAIVI MQLLGSQGYD
NLRSLIRNLR RLVLGAAT
|
|---|
| |