| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0839 |
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| Symbol | |
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| ID | 3681857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 1023857 |
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| End bp | 1025128 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 637716173 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_321358 |
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| Protein GI | 75907062 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.305723 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0285529 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAATGA AAAAGATAAA ACAACTATTA TCAAGTCAAT TTATCCGCAA TGTAGGTTGG
TTGGGAACAG CAGAGTTGAT AAATCGTATT TTTCGCTTAG GAACGACAGT AACTCTAGCG
CGAATGTTTA GTTCCCAAGA TTACGGAGCA ATGGCTCTCA TCTACACAAT TTTTGAATTT
GCCAATGTCT TCACTCTCAG AGGTGGTATC GGCGCAAAGA TTATTCAAGC TGATGAAAAG
GATCTGAACA CGATATGTAA TACTTCATTT TGGTTAAATC TCATTCTGGG TATTTCAGTT
TTCTTGTGCC AATGTATCGC TGCATTTCCC ATCGCTCAAT TTTATGGTAA TCAACAACTA
GTCTTCCCTA TCTGTACCCT AGCTGTTGTA TACCTGATAT ACCCTATTTA CATGATTAAT
TCTGCTCTGA TTGAACGCGA TAACCATCTA AAGATTACAG CTTTATGTAA TGCTATCCAA
GCATTTGTTG GAAATGTGAT TACAGTTGTG TTTGCTCTTT TAGGTATGGG GATTTGGGCT
ATAGTTTTAC CTATAGTTTT CTCAACTCCT GTTTGGGTTA TTGTTACGTG GATGAATAAC
TCTTGGCGAC CTCCGACAAA ATTTTCTCTC GATAAATGGC GAGAAGTTAC CAGTTTTGGA
AAAAATATTC TGGCTGTAGA ATTTTTGAAT AAAATCAGAA ATAACTTAGA TTATTTAATA
GTTGGTAAGT TTCTAGGTAC AGAACAATTA GGAATTTACT TTTTCGCCTT CAATGCTGGT
TCTGGTATTA GTATAAATGT GATTAATACA TTTATGTCTG CCTTATTTCC TTATATATGT
GCAGTCAGAG AAAATTTGGC AGAATTTAAG CAAAGATATG TCAATAGTTT AAAAAAGATT
CTATCGTTTG TCATACCAAT TATTCTAGCC CAAGCTATTT TAGCTCCTAT ATATGTGCCA
ATAGTCTTTG GCGAAAAATG GACGACAGCC GTACCAATTT TGATTTTAAT TTGTTTATCA
GTTATCCCTA GAGTATTTGG ATGGGCTAAT TCACTTTTAC TCAATGCTGT AGATAAAACA
AATATTAACT TAAATATTAA TCTTCTATTT ACTATATTTT TTGCCGCCGC AGTATTATTA
ACAGTTCAGT GGGGTGTGTT TTGGGTAGCT GTGGGTGTTT TATTATCTCA TGTACTGTTT
ATTCCTGCGT CTGTTTTATG GAGTTATAGG TATATTTTTC ACAATCGTAC TCACACTTTG
AGCAAGGTTT AG
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| Protein sequence | MLMKKIKQLL SSQFIRNVGW LGTAELINRI FRLGTTVTLA RMFSSQDYGA MALIYTIFEF
ANVFTLRGGI GAKIIQADEK DLNTICNTSF WLNLILGISV FLCQCIAAFP IAQFYGNQQL
VFPICTLAVV YLIYPIYMIN SALIERDNHL KITALCNAIQ AFVGNVITVV FALLGMGIWA
IVLPIVFSTP VWVIVTWMNN SWRPPTKFSL DKWREVTSFG KNILAVEFLN KIRNNLDYLI
VGKFLGTEQL GIYFFAFNAG SGISINVINT FMSALFPYIC AVRENLAEFK QRYVNSLKKI
LSFVIPIILA QAILAPIYVP IVFGEKWTTA VPILILICLS VIPRVFGWAN SLLLNAVDKT
NINLNINLLF TIFFAAAVLL TVQWGVFWVA VGVLLSHVLF IPASVLWSYR YIFHNRTHTL
SKV
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