Gene Ava_0823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0823 
Symbol 
ID3682348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1008573 
End bp1009355 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content40% 
IMG OID637716157 
Productcyclopropane-fatty-acyl-phospholipid synthase 
Protein accessionYP_321342 
Protein GI75907046 
COG category[R] General function prediction only 
COG ID[COG4106] Trans-aconitate methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.589192 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAATC TTGGGACAGC AAAAAATTTT TGGGATGCAA CCTTGTATCA AGATAAACAC 
AGTTTCGTAT GGCAATATGG CGAAGACTTG CTGCAATTAC TCAATCCCCA ACCAGGAGAA
TTTATTTTAG ATTTAGGTTG TGGTACTGGA CAACTGACGG AAAAAATTGC CCAATCTGGT
GCAGAGGTTT TGGGAACTGA TAATGCAGCC ACAATGATTG AGAAGGCTAG ACAAAACTAT
CCTCATTTGC ATTTCGATGT TGCTGATGCG CGAAACTTTC GAGTAGATAA ACCATTAGAT
GCCGTATTTT CCAATGCGAT GCTGCATTGG GTAAAAGAGC CAGAAGCAGC GATCGCCAGC
ATACATCAAG CATTAAAATC AGGAGGCCGC TTTGTAGCTG AGTTTGGTGG CAAGGGTAAT
ATAAAATACA TTCTTGAGGC TTTATACAAT GCTTTAGAAA CCCTTGGTAT TCATAACCCA
CAAGCACTAA ATCCTTGGTA TTTTCCCAGC ATTGGTGAAT ACGTTAATAT ACTAGAAAAA
CAAGGATTTG ATGTTACCTA TGCAGCTTTA TTTAACCGTC CCACTACCTT AGCAGAAGGT
GAATTCGGTA TGGCAAACTG GATTCAAATG TTCGCCAGTG CTTTTTTAGT AGGACTAACT
CCAGACCAAC AAGTACAATT AATTCGTAAG GTAGAAGCTA CTCTCCAAGA CAAACTTTAT
CACCAAGAAT CTTGGACAGC AGATTATCGA AGAATCCGTA TAGTCTCTAT CAAAGCTCAA
TAA
 
Protein sequence
MTNLGTAKNF WDATLYQDKH SFVWQYGEDL LQLLNPQPGE FILDLGCGTG QLTEKIAQSG 
AEVLGTDNAA TMIEKARQNY PHLHFDVADA RNFRVDKPLD AVFSNAMLHW VKEPEAAIAS
IHQALKSGGR FVAEFGGKGN IKYILEALYN ALETLGIHNP QALNPWYFPS IGEYVNILEK
QGFDVTYAAL FNRPTTLAEG EFGMANWIQM FASAFLVGLT PDQQVQLIRK VEATLQDKLY
HQESWTADYR RIRIVSIKAQ