Gene Ava_0819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0819 
Symbol 
ID3682339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp999067 
End bp999732 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content43% 
IMG OID637716148 
Productendonuclease V 
Protein accessionYP_321338 
Protein GI75907042 
COG category[L] Replication, recombination and repair 
COG ID[COG1515] Deoxyinosine 3'endonuclease (endonuclease V) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value8.67821e-06 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATTT ACCAACCTCA TCCTTGGCCG TTAACGGTGG AAGAAGCCAT AACTATTCAA 
GAAGAATTAA GACATCAAGT AATTACACAA GACCAATTTA CACAACCCGT GCAGTACGTC
GCTGGTGTTG ATATGGGTTT TGAAGCTGAT GGCACAATTA GCCGTGCCGC AGTAGCAGTA
CTGAGTTTTC CTGATTTACA AGTTGTCGAA ACTAGCCTAG CGTACCGTCC TACGTCATTT
CCCTACATTC CTGGTTTTCT CTCTTTCCGA GAAATACCAG CAGTACTTGA CGCTCTAGAA
AAAATTCAAA CAAAACCAGA TATTATTTTA TGTGATGGCC AAGGCATCGC CCATCCTCGA
AGGTTAGGTA TAGCTAGTCA CTTAGGAGTA CTACTGAACA TCCCAACAAT TGGTGTAGCC
AAATCTCTAT TAATTGGTAG ACATGAAGAA TTAGCAGACA CCAAAGGCAG TTGGCAACCA
CTCATACACA GAGGTGAAAT TATCGGTGCA GTTTTACGAA CCCGTGTAGG AGTAAAGCCT
GTGTATGTTT CCAGTGGACA TAAAATCAGT TTACCAACCG CTATCGACTA CGTATTGCGA
TGTACACCAA AATACCGCCT ACCAGAAACT ACTCGCGTAG CTGATAAACT AGCATCAAAC
CGATAA
 
Protein sequence
MQIYQPHPWP LTVEEAITIQ EELRHQVITQ DQFTQPVQYV AGVDMGFEAD GTISRAAVAV 
LSFPDLQVVE TSLAYRPTSF PYIPGFLSFR EIPAVLDALE KIQTKPDIIL CDGQGIAHPR
RLGIASHLGV LLNIPTIGVA KSLLIGRHEE LADTKGSWQP LIHRGEIIGA VLRTRVGVKP
VYVSSGHKIS LPTAIDYVLR CTPKYRLPET TRVADKLASN R