Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0793 |
Symbol | murD |
ID | 3680732 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 971948 |
End bp | 973315 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637716122 |
Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
Protein accession | YP_321312 |
Protein GI | 75907016 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0233019 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAAAG CCCATGTAGT TGGATTAGGA AAGTCCGGTG TTGCTGCGGC GAGATTGTTG AAACGGGAAG GTTGGGAGGT AGTGCTAAGC GATCGCAATA CCTCCGATAC CCTCCTAAAA CAGCAACAAG AACTCGCTAA AGAACAAATC ACAGTTGAAT TAGGGTATTC GCTAGATTTT GCTGGTGCTT TACCTGATTT GATTGTTGTC AGTCCCGGCG TTCCTTGGGA CATTCCCGCC TTAGTCAAAG CGCGAGAATT GGGCATAGAA ACTATCGGCG AAATGGAATT GGCTTGGCGA CATTTAAAGT CCTTGCCTTG GGTAGGAATT ACCGGCACTA ATGGCAAAAC CACCACCACC GCCTTAATCG CCGCTATCTT TCAAGCAGCA GGATTCGATG CCCCCGCCTG CGGTAACATC GGCTATGCAG CTTGTGAAGT TGCCTTAGCA GCAACGCCCC CAGACTGGAT AATTGGGGAA ATGAGCAGCT ATCAAATAGA ATCTTCCCTT ACCTTAGCCC CCCACATTAG TATCTGGACA ACCTTCACCC CAGACCACCT AGCCCGCCAC AAAACGTTAG AAAACTATTA CGACATCAAA GCCAAGTTAT TACGTCAATC CCATCTACAA GTGTTCAATG GTGATGATGC TTACCTATCT AAAATAGGTG CAAGTCATTG GCCGGATGCC TATTGGACAA GTGTGAAAGG GAAAGATTAC CTAATTGGTG ACAAAGGCTT TTATATTGAA GATGGCTGGG TGGTAGAACA ATTACAGCCA AACTCCTCGC CTCAAAGAAT TGTTGCAGCT GAAGCCTTAC GCATGGTAGG GGCGCACAAC CTGCAAAATC TCCTCATGGC AGTAGCCGCA GCCCGTTTAG CAGATATTCC CCCCAATGCC ATTGACAAGG CGGTGCGAGA ATTTCCAGGG GTTGCCCATC GCTTGGAACA TATCTGCACT TGGCAAGGCA TCGACTTTAT CAACGACAGC AAAGCCACCA ACTACGATGC GGCGGAAGTA GGTCTAGCAT CGGTGAAAAG CCCAGTGATT TTGATTGCTG GTGGTGAAGC CAAACCAGGG GATGATGCAG CTTGGTTAGC GAAAATCCAA GGGCAAACAT CAGCTGTATT ACTCATTGGC AACGCTGCAC CAGCATTTGC CCAACGCCTA CAAGAAATCG GCTATAGCAA TTATGAAATC GTGGAGACGA TGGAACAAGC GGTAAGGCGA TCGCTAGACT TAGCTAAACA CCATCAAGCA CCCGTAGTCT TACTATCCCC AGCCTGCGCT AGCTTTGACC AATACCCCAA TTTTGAAGCA CGGGGCGATC ATTTTCGTCA ATTGTGTCTG GAATTGGTAG GGTCGTAA
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Protein sequence | MSKAHVVGLG KSGVAAARLL KREGWEVVLS DRNTSDTLLK QQQELAKEQI TVELGYSLDF AGALPDLIVV SPGVPWDIPA LVKARELGIE TIGEMELAWR HLKSLPWVGI TGTNGKTTTT ALIAAIFQAA GFDAPACGNI GYAACEVALA ATPPDWIIGE MSSYQIESSL TLAPHISIWT TFTPDHLARH KTLENYYDIK AKLLRQSHLQ VFNGDDAYLS KIGASHWPDA YWTSVKGKDY LIGDKGFYIE DGWVVEQLQP NSSPQRIVAA EALRMVGAHN LQNLLMAVAA ARLADIPPNA IDKAVREFPG VAHRLEHICT WQGIDFINDS KATNYDAAEV GLASVKSPVI LIAGGEAKPG DDAAWLAKIQ GQTSAVLLIG NAAPAFAQRL QEIGYSNYEI VETMEQAVRR SLDLAKHHQA PVVLLSPACA SFDQYPNFEA RGDHFRQLCL ELVGS
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