Gene Ava_0783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0783 
Symbol 
ID3680508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp962323 
End bp963612 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content46% 
IMG OID637716112 
Producthomoserine dehydrogenase 
Protein accessionYP_321302 
Protein GI75907006 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0460] Homoserine dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00270854 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value5.75852e-08 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
GTGGGTGTAA AGCTGGGAAT CTTAGGATTA GGTACGGTAG GAACAGGGAC AGTGCAACTG 
CTACAAGATG CAGTTGGTCG TCACCCTTTA CTGCAAGAAA TAGAAATATA TCGGGTGGGA
GTACGATCGC CTAATAAATC CCGCGATGTA CAATTACAGC CGGAAGTTAT AACCACAGAT
TTAGAGTCAA TCGTCAATGA CCCGGCAGTA GATATTGTTG TTGAGGTCAT GGGAGGATTA
GAACCGGCGC GATCGCTTAT TCTCCAAGCC ATAAATAATG GTAAGCACGT AGTCACAGCT
AATAAAGCAG CGATCGCCCG TTTCGGGGCA GAAATTTTCA CGGCTGCTAA TCAAGCCGGA
GTCTACGTGA TGCTGGAAGC CGCCGTTGGT GGTGGTATTC CCGTAATTCA ACCATTAAAG
CAGGCTTTAA GTGTCAACAG GCTGCATACT GTTACAGGCA TTGTTAACGG TACCACTAAT
TACATCCTGA CTCGGATGCA AACAGAGGGT AGCGACTTCG GTGATGTATT AGCTGATGCT
CAACGTTTGG GTTATGCGGA GGCTGACCCT ACGGCAGATG TAGACGGCTT AGATGCAGGG
GATAAAATTG CTATTCTGGC ATCACTAGCT TTTGATGGGC GAATTAACTT AGAGGATGTG
TATTGTGAGG GGATTCGCCA AGTCAGTAAG ACAGATATTG CCTATGCCGA AAAATTGGGA
TTTGTGATTA AATTACTGGC GATCGCTAAA AATCAGGCTC AAGATGCCAC TAAACTATCG
GTAAGGGTTC ACCCTACCTT CGTACCCAAA ACACATCCCT TAGCCAGCAT TAACGGCGTG
TATAACGCCA TTCTCGTAGA AGGAGAACCC ATAGGTCAGG TGATGTTTTT TGGCCCTGGT
GCAGGTGCAG GTGCAACCGC CAGCGCCGTC ACCTCAGATA TATTAAGTTT GGTAGCAGCG
CTAAAAAGCA ATACAACAGC CCCTAATCCC CTATTAACCT GTAGACACGA AGAATATAGC
CAAGTTGCTC CCATCAGCGA CCTTCTGACG CGATTTTATG CCCGATTCCT CACCAAAGAC
CAAGCTGGTG TAATCGGTCA ATTGGGTACT TGCTTCGGTA ATCATGGTGT GAGTATAGAA
TCAATCGTCC AAACTGGCTT TCAAGGAGAA CTAGTAGAGA TAGTAGTTGT GACTCACGAT
GTCAGGGAAG GTGAATTTCG CCAAGCCTTA GCAGAAATTC AAAATTTACC AGCTATTGAC
AGTATTCCTA GCATATTGCG GGTGTTGTAG
 
Protein sequence
MGVKLGILGL GTVGTGTVQL LQDAVGRHPL LQEIEIYRVG VRSPNKSRDV QLQPEVITTD 
LESIVNDPAV DIVVEVMGGL EPARSLILQA INNGKHVVTA NKAAIARFGA EIFTAANQAG
VYVMLEAAVG GGIPVIQPLK QALSVNRLHT VTGIVNGTTN YILTRMQTEG SDFGDVLADA
QRLGYAEADP TADVDGLDAG DKIAILASLA FDGRINLEDV YCEGIRQVSK TDIAYAEKLG
FVIKLLAIAK NQAQDATKLS VRVHPTFVPK THPLASINGV YNAILVEGEP IGQVMFFGPG
AGAGATASAV TSDILSLVAA LKSNTTAPNP LLTCRHEEYS QVAPISDLLT RFYARFLTKD
QAGVIGQLGT CFGNHGVSIE SIVQTGFQGE LVEIVVVTHD VREGEFRQAL AEIQNLPAID
SIPSILRVL