| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0721 |
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| Symbol | prfA |
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| ID | 3679376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 890667 |
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| End bp | 891767 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637716049 |
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| Product | peptide chain release factor 1 |
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| Protein accession | YP_321240 |
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| Protein GI | 75906944 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0216] Protein chain release factor A |
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| TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.000614625 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.652309 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGAAT CATACCTGCT GGAGAAACTG AAATCCGTTG AACAAACCTT CAATGAATTA
ACTCGTCGCC TAGCTGACCC TGATACTGCT AGAAACCCCG ATGAGTATCA AAAAATTGCC
AAGTCTCGTT CTTCTCTAGA AGAAGTTGTC AATACTTATG AAACTTGGAA AATAGCCCAG
GAAGAATTAA TAGGGGCGCG TCAAGTACTT AAAGAGTCAA ATAGCGATCC GGAGTTGCAA
GAAATAGCAG CTTTGGAAGT AAATGAATTA GAAGAAAAAA TAAAATATCT AGAAACTCGC
TTGAAGGTGT TACTTCTACC CCGTGACCCC AACGATGATA AAAACATCAT GTTGGAAATC
CGTGCTGGTA CTGGTGGCGA TGAAGCGAGT ATTTGGGCTG GTGACTTACT GCGGATGTAT
TCTCGCTATG CTGATACTCA AGGCTGGCGG GTGAAGTTGG TGAGTGAGTC CCTTGGGGAA
ATGGGCGGCT TCAAAGAAGT GATTCTGGAA ATTCAAGGTG ACAGCGTTTA CAGTAAGCTG
AAATTTGAAG CAGGTGTTCA TAGGGTGCAG CGTGTACCAG CGACGGAAGC TGGGGGAAGG
GTACATACTT CAACTGCAAC CGTGGCAATT ATGCCAGAAG TGGATGAGGT TGAAATCCAC
ATTGACCCGA AAGATATTGA AATGACTACG GCTCGTTCTG GTGGTGCTGG TGGACAAAAC
GTCAACAAGG TGGAAACTGC TGTTGACTTA ATGCACAAAC CGACGGGAAT ACGAATTTTC
TGCACAGAAG AACGCAGTCA GTTGCAAAAC AAAGAACGGG CGATGCAGAT TCTGAGGGCG
AAGTTGTATG AGATAAAGCT GCGCGAACAA CAAGAAGAAG TTACCTCGAT GCGGCGATCG
CAAGTTGGAA CAGGATCGCG ATCTGAGAAA ATTCGCACTT ATAATTATAA AGATAGCCGT
GCCACTGACC ACCGTTTAGG TCAAAACTTT TCGCTGAACC CTGTTTTGGA AGGCGATTTA
GAAACGGTCA TCCAATCTTG TATTTCTCAA GACCAGCAAG AACGGTTGGC AGAGTTAGCA
ACTTCTAGTG CTGCTGGTTA A
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| Protein sequence | MAESYLLEKL KSVEQTFNEL TRRLADPDTA RNPDEYQKIA KSRSSLEEVV NTYETWKIAQ
EELIGARQVL KESNSDPELQ EIAALEVNEL EEKIKYLETR LKVLLLPRDP NDDKNIMLEI
RAGTGGDEAS IWAGDLLRMY SRYADTQGWR VKLVSESLGE MGGFKEVILE IQGDSVYSKL
KFEAGVHRVQ RVPATEAGGR VHTSTATVAI MPEVDEVEIH IDPKDIEMTT ARSGGAGGQN
VNKVETAVDL MHKPTGIRIF CTEERSQLQN KERAMQILRA KLYEIKLREQ QEEVTSMRRS
QVGTGSRSEK IRTYNYKDSR ATDHRLGQNF SLNPVLEGDL ETVIQSCISQ DQQERLAELA
TSSAAG
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