Gene Ava_0718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0718 
SymbolrplM 
ID3679373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp889353 
End bp889808 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content45% 
IMG OID637716046 
Product50S ribosomal protein L13 
Protein accessionYP_321237 
Protein GI75906941 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0102] Ribosomal protein L13 
TIGRFAM ID[TIGR01066] ribosomal protein L13, bacterial type 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000264986 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.589192 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAAA CCTATCTTCC TCCTCAAGAA TCCCTTGAGC GTGATTGGTA CGTAGTAGAT 
GCTACGGACA AACGCCTGGG TCGCCTTGCC AGTGAAATTG CCATGATTTT AAGAGGCAAA
AATAAGGCAC ACTACACCCC ACACCTAGAT ACAGGTGACT TCGTGATTGT TGTAAATGCT
GAAAAAGTAG CAGTTACAGG CAAGAAACGT ACTCAGAAGC TTTACCGTCG TCACTCTGGT
CGTCCAGGTG GGATGAAAAC AGAAACCTTT GCTAAACTGC AACAGCGCTT ACCAGAAAGA
ATCGTGGAAC ACGCTGTCAA AGGTATGCTA CCCAAAAATA GCCTGGGTAA GCAGTTGTTT
ACCAAACTGA AAGTTTACGC TGGGCCGACT CATCCCCACG ATGCCCAAAA ACCTAAAGAA
CTAAACATTA ATACAATCCC TGGAGCAGAA AGTTAA
 
Protein sequence
MSKTYLPPQE SLERDWYVVD ATDKRLGRLA SEIAMILRGK NKAHYTPHLD TGDFVIVVNA 
EKVAVTGKKR TQKLYRRHSG RPGGMKTETF AKLQQRLPER IVEHAVKGML PKNSLGKQLF
TKLKVYAGPT HPHDAQKPKE LNINTIPGAE S