| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0692 |
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| Symbol | rplD |
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| ID | 3678838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 874767 |
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| End bp | 875399 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637716020 |
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| Product | 50S ribosomal protein L4 |
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| Protein accession | YP_321211 |
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| Protein GI | 75906915 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0088] Ribosomal protein L4 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.000477042 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTAGAGA GTGTAGTAAA AAATTGGCAG GGAGAGCAAG TCGGACAGAA AACGTTCGAG
TTGCGGGTTG CCAAAGAAAC AACGGCGGCG CACATCGTAC ACCGCGCCCT AGTTAGACAA
CAAACCAACG CTCGTCAAGG AACAGCCAGC ACCAAAACCC GTGCTGAAGT CCGAGGCGGT
GGTCGTAAAC CCTGGCGGCA AAAAGGCACA GGTCGCGCTC GTGCAGGTTC CATCCGTTCA
CCATTATGGC GTGGTGGTGG TGTGATCTTT GGACCCAAAC CCAGAGATTT CGATTTAAAA
ATGAACCGCA AAGAGCGGCG TTTAGCACTG CGGACAGCAC TTGTCAGCCG TATAGACGAT
TTGATTTTAG TAGAAGAATT TAGCAACGAG CTATCCCGCC CCAAAACCAA AGATTTAGTG
GCAGCATTCA CTCGTTGGGG TGCAGAACCG GAAAGCAAAA TATTGTTAAT TTTGTCGGAA
TTTCCTGAAA ACGTGTATTT GTCTGCTCGT AACATTGAGA ACTTAAAACT CATTGCGGCT
GACCAACTCA ACGTTTATGA CTTGCTGCAC GCTGACAAAA TAGTTGTCAC CACATCAGCA
TTAGAAAAAA TTCAGGAGGT CTACAATGGC TAA
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| Protein sequence | MVESVVKNWQ GEQVGQKTFE LRVAKETTAA HIVHRALVRQ QTNARQGTAS TKTRAEVRGG
GRKPWRQKGT GRARAGSIRS PLWRGGGVIF GPKPRDFDLK MNRKERRLAL RTALVSRIDD
LILVEEFSNE LSRPKTKDLV AAFTRWGAEP ESKILLILSE FPENVYLSAR NIENLKLIAA
DQLNVYDLLH ADKIVVTTSA LEKIQEVYNG
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