Gene Ava_0663 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0663 
Symbol 
ID3678634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp844539 
End bp844967 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content40% 
IMG OID637715991 
Productputative anti-sigma regulatory factor (Ser/Thr protein kinase) 
Protein accessionYP_321182 
Protein GI75906886 
COG category[T] Signal transduction mechanisms 
COG ID[COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00575622 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0631773 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGCG AGCTTCATGT ACCAAGCGAC TTGAACTATT TAAACATAGT GGAACACTGG 
TTATTGGGAT GCTTGAAAAT CCAGTTAGGA GAATCTGTTG ATTGGTCAAG ACAGTCCAGC
CGGTTACGGT TAGCTTTAGT AGAAGCCTAT TCTAATGTTG TGCGTCATGC CCATAAAGAG
CAACCAAATT TGCCAGTCTT ACTACGCTTG GAATTTAAAG AACGAGATAT TGCTTTGGAA
ATTTGGGACT ACGGCACAGG TTTTGATATG TCTACCTACT TCCCGCCCAA CCCTGGTGAT
AGGCAAGAAG GTGGCTATGG TTGGTTAATT ATGAATCGTT TAATGGATAA AGTAGAATAT
CAGTTACAAG TTGATGGAGC TAATTGTCTC AAGTTAGAAG CTACTATACC GGAATTAGCA
AATAATTAA
 
Protein sequence
MKSELHVPSD LNYLNIVEHW LLGCLKIQLG ESVDWSRQSS RLRLALVEAY SNVVRHAHKE 
QPNLPVLLRL EFKERDIALE IWDYGTGFDM STYFPPNPGD RQEGGYGWLI MNRLMDKVEY
QLQVDGANCL KLEATIPELA NN