Gene Ava_0660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0660 
Symbol 
ID3678631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp840593 
End bp841345 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content44% 
IMG OID637715988 
ProductN-acetylmannosaminyltransferase 
Protein accessionYP_321179 
Protein GI75906883 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1922] Teichoic acid biosynthesis proteins 
TIGRFAM ID[TIGR00696] bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.89682e-11 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0689517 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCCAT CATCTAAAGT GTTTTTAGTA CTGGGAATTC CAGTTCATGT AATGAGTGAC 
TATCCGAGTT GGTTACTGGA ATGCCTGCGA CATGGGAAAG GCGCTCATGT AGTGACACTC
AATGCAGAAA TGACGATGCA GGCACAGCAA AATACATCCT TGAACAACAT AATTCAGAAT
GCTGAGTTGG TAATTCCTGA TGGTGCAGGA GTGGTGATGT ATTTGCGGTG GCTTTGTTGG
CAAAAAGTCC AACGCTGTCC GGGAATTGAA CTGGCGGAAA CGCTGTTAAA AGCAATCGGT
CAAGAGCAAG CCGATAAAAC TGTGTTCTTT TATGGAGGAG CGCCAGGAGT AACCGCACAA
GCGGCGAATG ATTGGCAGCA AAAAATACCT AGTTTGAATA TAGTAGGTAC TCATTCCGGT
TACCATTCTG GGGAAGAAGA AAAACAACTA CAACAAACTC TCGCCCAATT ACAACCACAA
GTAATTTTGG TTGGTTTGGG TGTTCCACGG CAAGAATTAT GGATTGCCCA AAATCGTCAT
TTGTGTCCTC AAGCCATTTG GATTGGTGTT GGCGGTAGTT TTGATATTTG GTCAGGAAGT
AAAGATCGCG CACCCGCTTG GTTGGCTAAT AATAATTTGG AATGGCTATA TCGTTTATAT
AAAGAGCCTT GGCGTTGGCG GCGAATGTTG GCTCTGCCTC AGTTTGCGGT GAAAGCCTTT
GTTTACCGTT TGACTATGAA GGGTGCGATT TAG
 
Protein sequence
MFPSSKVFLV LGIPVHVMSD YPSWLLECLR HGKGAHVVTL NAEMTMQAQQ NTSLNNIIQN 
AELVIPDGAG VVMYLRWLCW QKVQRCPGIE LAETLLKAIG QEQADKTVFF YGGAPGVTAQ
AANDWQQKIP SLNIVGTHSG YHSGEEEKQL QQTLAQLQPQ VILVGLGVPR QELWIAQNRH
LCPQAIWIGV GGSFDIWSGS KDRAPAWLAN NNLEWLYRLY KEPWRWRRML ALPQFAVKAF
VYRLTMKGAI