Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0649 |
Symbol | |
ID | 3678678 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 822336 |
End bp | 823499 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637715977 |
Product | response regulator receiver Signal transduction histidine kinase |
Protein accession | YP_321168 |
Protein GI | 75906872 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.736737 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.226718 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAAA TTCTGGTTAT TGAAGATGAT ATCCATGTAC GCCAAAATAT CTTAGATTTG TTAGAAGGTG AAGGATTTAA TATACTTGAA GCGCATAATG GACTCCTTGG TGTGCAATTA GCTCAAGAAG AAATTCCTGA CTTAATTATT TGTGATGTCA TGATGCCGGA ACTAGATGGA TATGAAGTCT TAAAGGTATT ACGTCAATGT CCAGAAACAG CAATAATTCC TTTAATTTTT CTAACTGCTA AGTCTGATAA AAATGACTTC CGTCAAGGTA TGGAGATGGG AGCAGATGAC TATATCATTA AACCTTTTAC AAGAGCAGAG CTATTAGCAG CTATTGCCTG TCGATTAGAG AAACATATCA CAATTAAACA AGAGAATCAA AGAAAACTAG ATAATCTGCG TAACAGTATT GCTTTATCTT TGCCTCACGA AATGCGAACA CCTTTAAACG GGATATTAGG CTTTTCTCAA ATTCTGATGG AAGAGAGTGA TAGTCTTGAT TCGCAAGCAA TCCAGGAAAT GGCAGAATCC ATCTATCTAT CTGGTGAACG TCTATTTAGC TTGATTCAGA ACTTTTTAAT GTACGCAGAG TTAGAAGTTA TGGGAACTGA CCCACAGCAA ATTAAATTGC TGCAAAGTCA AACTACCATA TTTCCTAATC TAACACTAAT GGAAATCATT AGTGAAAAAG CTAAAAAAGC AGGAAGAGAA GCCGATTTAC GGTTAGAATT ACATCCTTGT AATGTAAGAA TTTCCACAGC TAAGATTGCT AAAATTATAG AAGAATTATT AGATAATGCT TTCAAATTTT CCCCTCCAGG TAGCCTAGTT CAAATCAAAA ATCAGGTTAT TAATAATTGC TTAATCTTAT CATTTATCGA TCATGGACGA GGAATTACAG CAGCACAAAT TGCTGAATTA GGAGCGTATC AGCAATTTGA GCGTAAACTT TATGAGCAGC AAGGTTCTGG ATTAGGTTTA ACTATTGCTA AACGCATAGC TGAACTACAT GGCGGTAAAT TAAAAATTCA CAGCAAGCCA CAAGAAAAGA CTATTGTGCA AGTAGCACTA CCATGTAGCC AGCGAAAAGA AGACTATTGT GACAATACTT ACTATCAAAA ATCGTCAATT ATAGGCATCC GACTTGATCA TTGA
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Protein sequence | MNKILVIEDD IHVRQNILDL LEGEGFNILE AHNGLLGVQL AQEEIPDLII CDVMMPELDG YEVLKVLRQC PETAIIPLIF LTAKSDKNDF RQGMEMGADD YIIKPFTRAE LLAAIACRLE KHITIKQENQ RKLDNLRNSI ALSLPHEMRT PLNGILGFSQ ILMEESDSLD SQAIQEMAES IYLSGERLFS LIQNFLMYAE LEVMGTDPQQ IKLLQSQTTI FPNLTLMEII SEKAKKAGRE ADLRLELHPC NVRISTAKIA KIIEELLDNA FKFSPPGSLV QIKNQVINNC LILSFIDHGR GITAAQIAEL GAYQQFERKL YEQQGSGLGL TIAKRIAELH GGKLKIHSKP QEKTIVQVAL PCSQRKEDYC DNTYYQKSSI IGIRLDH
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