Gene Ava_0649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0649 
Symbol 
ID3678678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp822336 
End bp823499 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content35% 
IMG OID637715977 
Productresponse regulator receiver Signal transduction histidine kinase 
Protein accessionYP_321168 
Protein GI75906872 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.736737 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.226718 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAA TTCTGGTTAT TGAAGATGAT ATCCATGTAC GCCAAAATAT CTTAGATTTG 
TTAGAAGGTG AAGGATTTAA TATACTTGAA GCGCATAATG GACTCCTTGG TGTGCAATTA
GCTCAAGAAG AAATTCCTGA CTTAATTATT TGTGATGTCA TGATGCCGGA ACTAGATGGA
TATGAAGTCT TAAAGGTATT ACGTCAATGT CCAGAAACAG CAATAATTCC TTTAATTTTT
CTAACTGCTA AGTCTGATAA AAATGACTTC CGTCAAGGTA TGGAGATGGG AGCAGATGAC
TATATCATTA AACCTTTTAC AAGAGCAGAG CTATTAGCAG CTATTGCCTG TCGATTAGAG
AAACATATCA CAATTAAACA AGAGAATCAA AGAAAACTAG ATAATCTGCG TAACAGTATT
GCTTTATCTT TGCCTCACGA AATGCGAACA CCTTTAAACG GGATATTAGG CTTTTCTCAA
ATTCTGATGG AAGAGAGTGA TAGTCTTGAT TCGCAAGCAA TCCAGGAAAT GGCAGAATCC
ATCTATCTAT CTGGTGAACG TCTATTTAGC TTGATTCAGA ACTTTTTAAT GTACGCAGAG
TTAGAAGTTA TGGGAACTGA CCCACAGCAA ATTAAATTGC TGCAAAGTCA AACTACCATA
TTTCCTAATC TAACACTAAT GGAAATCATT AGTGAAAAAG CTAAAAAAGC AGGAAGAGAA
GCCGATTTAC GGTTAGAATT ACATCCTTGT AATGTAAGAA TTTCCACAGC TAAGATTGCT
AAAATTATAG AAGAATTATT AGATAATGCT TTCAAATTTT CCCCTCCAGG TAGCCTAGTT
CAAATCAAAA ATCAGGTTAT TAATAATTGC TTAATCTTAT CATTTATCGA TCATGGACGA
GGAATTACAG CAGCACAAAT TGCTGAATTA GGAGCGTATC AGCAATTTGA GCGTAAACTT
TATGAGCAGC AAGGTTCTGG ATTAGGTTTA ACTATTGCTA AACGCATAGC TGAACTACAT
GGCGGTAAAT TAAAAATTCA CAGCAAGCCA CAAGAAAAGA CTATTGTGCA AGTAGCACTA
CCATGTAGCC AGCGAAAAGA AGACTATTGT GACAATACTT ACTATCAAAA ATCGTCAATT
ATAGGCATCC GACTTGATCA TTGA
 
Protein sequence
MNKILVIEDD IHVRQNILDL LEGEGFNILE AHNGLLGVQL AQEEIPDLII CDVMMPELDG 
YEVLKVLRQC PETAIIPLIF LTAKSDKNDF RQGMEMGADD YIIKPFTRAE LLAAIACRLE
KHITIKQENQ RKLDNLRNSI ALSLPHEMRT PLNGILGFSQ ILMEESDSLD SQAIQEMAES
IYLSGERLFS LIQNFLMYAE LEVMGTDPQQ IKLLQSQTTI FPNLTLMEII SEKAKKAGRE
ADLRLELHPC NVRISTAKIA KIIEELLDNA FKFSPPGSLV QIKNQVINNC LILSFIDHGR
GITAAQIAEL GAYQQFERKL YEQQGSGLGL TIAKRIAELH GGKLKIHSKP QEKTIVQVAL
PCSQRKEDYC DNTYYQKSSI IGIRLDH