| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0621 |
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| Symbol | |
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| ID | 3678650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 780749 |
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| End bp | 782881 |
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| Gene Length | 2133 bp |
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| Protein Length | 710 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637715949 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_321140 |
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| Protein GI | 75906844 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.749458 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.582939 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACACCT TACGCCGCCA AGAAAATGAT TTTTGGCATC GATCGCATCA GCCAATTCCC
GAAGAACTTC CTACGTTAGA AGCTAACGAG TTTCTACCCC ATATTGGGAA ATGGACAAGT
ATCGGTGGGG TGGTTGTCTT CAGTATCTTT GTTGTAGGAG TTGCACTAAC ATCTGTTCTC
AAGTACAACG TGACGGTGAA AGTGCCGGCG ACTATTCGCC CTGTGGGAGA ATTAAAGCTT
GTACAGTCAT TGGTTAGTGG CAAAATTCTC AAAATTGATG TTGCAGAAAA TCAGATGGTG
AATGAAGGAC AAGCGATCGC CTACATTGAT GATTCGCGTC TGCAAACCCA AAAGAGCCAA
TTACAAAACC TGATTCAGCA AAGTCAACTA CAACTCAATA AAATCGATGC ACAGTTGGGA
GAAATCGATG CTCAAATTAC AGCACAGACG AATTTAAACG ATCGCACCAC TATAGCCGCA
CAAGCTGAAC TTAGTGGTAC ACAACGCAAC TATGCAGATC AGCAAGTGAA AGCTACGGCG
GATATGACAC AAGCACAATC AGCCTTAACT TTAGCCAGAA TCCAAAAAGA CCGCCTGCAA
CGGGAAAAGC TGTTAACGGC GACGGTGCGA GAAACAGAAG CCGCTTTAAA TTTAGCCAGG
GTGCAAAGCG ATCGCCTACA ACGGGAAAAG CTCCTAAAAA CTACCGTAGA TGAAGCGGAA
ACAGGCTTAA AATTGGCGAG AGAACAACGC GATCGTTTAC GGCGGGATAG GCTTCTCAGG
ACGACTGTGC AAGAAACAGA AACCGCCTTG AATTTGGCGA AGGCGCAACA AGAAAGATTA
CAGAGGGAAC AACTCTTAGC TAAAACTGTG CAGGAAGCAG AAACCGCTTT AAATTTAGCC
AGGGTACAAC GCGATCGCCT ACAACAAGAT AAGGTACTTA CTGCAACTGT CCAGGAAGCA
GCCGCCGCCT TGAGTTTAGC TAGAGTACAG CGAGAAAGAT TACAGCCGAT AGTAGCATCA
GGAGCGATCG CCCGTAGTTT CTTTGAAGAA AAAGACCAAG CCGTGATTTC AGCTGAGGCG
AGGTTGGAAC AAGCCAAAGC TAACGCTAAA AATCTCTTGG AAGATAAAGA ACAAGCGGTG
ATTTCGGCGG AAGCGAAACT GGAACAAGCC AAAGCTAACG CCAAAAATCT CTTAGAGGAG
AAAGAACAGG CTGTCAAATC GGCGGAAGCG AAACTGGAAC AAGCCAAAGC TAACGCTAAA
AATCTCTTGG AGGAAAAAGA CCAAGGTGTA ATTACGGCGG AGGCGAAACT GGAACAAGCT
AAAGCCAACG CCAAAAATCT TTTAGAGGAG AAAGAACAAG CGGTGATTGC GGCGGAGGCG
AAGCTAGAAC AAGCCAAAGC TAACGCCAAA AATCTCCAAG AAGAAAAAGA CCAAGCTTTA
ACAGTGGCGC AAACCAATCT CGCCAAGGCT AGAACCGAGA TAAATCCCAA TGATGCAAGT
GTGACTGTAG CATCGGAAAG AATTAAACAA GAACAAGCCA GAGGTGAAGT TACTTTAGCC
GCCTTGAAAA AAGAAAGAGA GACTTTGCTA CAACAACGTT TAGAATTTCA AAAACAACTG
GACAGAAACC GCAAAGAACT ACAACAAGCC GAAAATGACC TAAACCAGAG TGTAGTCCGC
GCACCCATCG CCGGGACAGT GCTGCAATTG AATTTGCGTA ACCCCGGACA GGTAGTACAA
GCGAGTGAGG CGATCGCTCA AATTGCACCT TTAAATGCAC CAATACAAAT CAAAGCTAAC
GTCCAGGCAC AAGATATCAA CAAAGTCAAA CCCGGTCAAC AAGTCCAAAT GCAGGTTTCT
GCTTGTCCCT ACCCAGACTA CGGCACTCTC AAAGGAACAG TCAAAACAAT TGCCCCAGAT
GCCCTACCCG TAGCTAACAA TAACCCGCAG ACCACCACAG CTAAAACCGC AGCCTATGAA
GTTATTGTAG AACCACAAAC CCCATACGTT GGCAGAGGCG ATCGGCAATG TCAACTCAAA
ACCGGAATGC AGGGTAAAGC AGATATCATT TCCCGCAGAG AAACAGTATT AAGGTTCATC
CTCCGCAAAG CCAGATTAAT TGCAGATTTG TAA
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| Protein sequence | MNTLRRQEND FWHRSHQPIP EELPTLEANE FLPHIGKWTS IGGVVVFSIF VVGVALTSVL
KYNVTVKVPA TIRPVGELKL VQSLVSGKIL KIDVAENQMV NEGQAIAYID DSRLQTQKSQ
LQNLIQQSQL QLNKIDAQLG EIDAQITAQT NLNDRTTIAA QAELSGTQRN YADQQVKATA
DMTQAQSALT LARIQKDRLQ REKLLTATVR ETEAALNLAR VQSDRLQREK LLKTTVDEAE
TGLKLAREQR DRLRRDRLLR TTVQETETAL NLAKAQQERL QREQLLAKTV QEAETALNLA
RVQRDRLQQD KVLTATVQEA AAALSLARVQ RERLQPIVAS GAIARSFFEE KDQAVISAEA
RLEQAKANAK NLLEDKEQAV ISAEAKLEQA KANAKNLLEE KEQAVKSAEA KLEQAKANAK
NLLEEKDQGV ITAEAKLEQA KANAKNLLEE KEQAVIAAEA KLEQAKANAK NLQEEKDQAL
TVAQTNLAKA RTEINPNDAS VTVASERIKQ EQARGEVTLA ALKKERETLL QQRLEFQKQL
DRNRKELQQA ENDLNQSVVR APIAGTVLQL NLRNPGQVVQ ASEAIAQIAP LNAPIQIKAN
VQAQDINKVK PGQQVQMQVS ACPYPDYGTL KGTVKTIAPD ALPVANNNPQ TTTAKTAAYE
VIVEPQTPYV GRGDRQCQLK TGMQGKADII SRRETVLRFI LRKARLIADL
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