Gene Ava_0615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0615 
Symbol 
ID3678548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp773994 
End bp774680 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content42% 
IMG OID637715943 
Producttwo component transcriptional regulator 
Protein accessionYP_321134 
Protein GI75906838 
COG category[T] Signal transduction mechanisms
[K] Transcription 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0841359 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.719107 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCAC ACATTCTTTT GGTTGAAGAT GAAGTTAAAC TAGCGCGGTT TGTCGAATTG 
GAACTGAGTA GTGAAGGTTA CAAAGTCAGT GTTGCTCATG ATGGAATTAC TGGACTCACC
TTGGCGCGGG AGTCAACGCC TGATTTAGCG GTTCTTGATT GGATGTTACC AGGACTATCA
GGTTTAGAAA TTTGCCGCCG TCTGCGAGCA ACGGGTAATT CAATACCTGT AATTTTGTTA
ACTGCCAGAG ATGAAGTGAG CGATCGCGTG GCAGGATTAG ATGCAGGAGC TGATGATTAT
GTAGTCAAAC CCTTTAGCAT TGAGGAATTA TTGGCAAGAA TTCGCGCCCA TCTGCGCCGC
ACCCAAGAAA CAGATGAAGA TTTATTGCAG TTTGAAGACC TAAGTTTAAA TCGCCGCACT
CGTGAAGTGT TTCGGGGTAA CAGAGCAATT GAATTAACAG CAAAGGAGTT TGATTTATTA
GAGTATCTTC TTTCCCATCC CCGTCAGGTT TTTACCAGAG ATCAAATTCT CGAAAAAGTT
TGGGGTTATG ATTTTATGGG TGATTCCAAC ATCATCGAAG TTTACATCCG TTATTTGCGG
CTTAAGTTAG AAGAACACAA CGAAAAGCGT TTGATTCATA CAGTCCGTGG TGTAGGATAT
GCACTACGAG AATATCCCAA CAAATAA
 
Protein sequence
MTAHILLVED EVKLARFVEL ELSSEGYKVS VAHDGITGLT LARESTPDLA VLDWMLPGLS 
GLEICRRLRA TGNSIPVILL TARDEVSDRV AGLDAGADDY VVKPFSIEEL LARIRAHLRR
TQETDEDLLQ FEDLSLNRRT REVFRGNRAI ELTAKEFDLL EYLLSHPRQV FTRDQILEKV
WGYDFMGDSN IIEVYIRYLR LKLEEHNEKR LIHTVRGVGY ALREYPNK