Gene Ava_0554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0554 
Symbol 
ID3682326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp699400 
End bp700293 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content45% 
IMG OID637715882 
Productacetylglutamate kinase 
Protein accessionYP_321073 
Protein GI75906777 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0548] Acetylglutamate kinase 
TIGRFAM ID[TIGR00761] acetylglutamate kinase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.879034 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0558608 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGTCA ACGATATTGA GTATATCAGG CAAGCTGAAG CTACTCGTGT GCAGGTACTA 
AGCGAAGCAC TACCTTATAT TCAACAATTT GCCGGTCGCA CCGTTGTTGT TAAATATGGT
GGTGCGGCTA TGAAAGATAG CCACCTCAAA GACCAAGTTA TCCGCGATAT TGTTTTTTTA
TCCTGCGTTG GGTTGCGACC AATCTTAGTA CATGGTGGCG GCCCGGAAAT TAACAGTTGG
TTAGATAAGC TGGGAATTGA AGCACAGTTT AAGAACGGTC TACGAGTCAC CGATGCTCCC
ACAATGGATG TTGTGGAAAT GGTGTTGGTA GGTCGAGTTA ATAAAGAAAT TGTCTCCCTA
ATTAACCAAG CTGGCGGCTT GGCAGTAGGA CTTTGTGGCA AAGATGGTAA CCTAATTACT
GCCCGTCCCC AAGGCCAAGA GGGTATTGGC TTTGTCGGGG AAGTGAGTAA CGTTAACATC
AAAATTTTGG AAACTTTGGC GAGTAACGGT TATATTCCCG TCGTTTCTAG CGTTGCTGCC
GATGACTCAG GACAGGCTTA CAATATTAAC GCCGATACTG TAGCTGGTGA AATTGCTGCT
GCCTTAGGGG CAGAAAAACT GATTTTATTA ACGGACACCA GAGGTATTTT AAAAGATTAT
AAAGACCCTG GAACATTGAT TCCCAAAGTA GATATTCGGG AAGCCCGCGA ATTAATTAAT
GGTGGTGTTG TTAGCGGTGG GATGATCCCC AAAGTTACTT GTTGTGTGCG ATCGCTCGCT
CAAGGAGTCA GAGCCGCACA CATCATAGAC GGCCGTATTC CCCACGCCTT ACTACTGGAA
ATCTTTACTG ATGTGGGTAT TGGGACAATG ATTCTCGGTT CTCAGTATAG TTAA
 
Protein sequence
MMVNDIEYIR QAEATRVQVL SEALPYIQQF AGRTVVVKYG GAAMKDSHLK DQVIRDIVFL 
SCVGLRPILV HGGGPEINSW LDKLGIEAQF KNGLRVTDAP TMDVVEMVLV GRVNKEIVSL
INQAGGLAVG LCGKDGNLIT ARPQGQEGIG FVGEVSNVNI KILETLASNG YIPVVSSVAA
DDSGQAYNIN ADTVAGEIAA ALGAEKLILL TDTRGILKDY KDPGTLIPKV DIREARELIN
GGVVSGGMIP KVTCCVRSLA QGVRAAHIID GRIPHALLLE IFTDVGIGTM ILGSQYS