| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0553 |
|---|
| Symbol | aroK |
|---|
| ID | 3682325 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 698769 |
|---|
| End bp | 699314 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637715881 |
|---|
| Product | shikimate kinase |
|---|
| Protein accession | YP_321072 |
|---|
| Protein GI | 75906776 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0703] Shikimate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.387005 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.100064 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAGTT TATTGCAGGG AGTTAACCTA TACTTAATCG GTATGATGGG CGCTGGTAAG
ACTACAGTAG GACATTTACT CGCCCAGGAA TTGGGTTATG GCTTTTTAGA TACTGATAAT
GTTATTGCCC AAGCTGCTAA AAAATCTATC AACGAGATAT TTGCCGAAGC AGGGGAAGCG
GGATTTCGCC AGATAGAAAG CGATGTGCTA GCGCAGGTTT GTTCCTATAC TAAGTTGACT
GTAGCGACAG GTGGGGGTAT TGTGTTGCGA CGAGAAAACT GGAGTTACCT ACACCACGGT
TTAATTGTGT GGCTAGATGT CTCAGTAGAT ATACTCTATG CACGTTTAGC GGCAGATACA
ACAAGACCAC TTTTACAGGA TGATGACCCT AAAGGCAAAT TGCGATCGCT TCTAGAACAA
CGAACACCGC TTTATTCGCA AGCAGATTTA CGCATCTGTG TCAATGCAGA AGAAACACCA
GAACAAATTG CCAATAAAAT TATGCAGGTC ATTCCCAGCG TCCTGAAACA AACTACTGCT
AATTAG
|
|---|
| Protein sequence | MSSLLQGVNL YLIGMMGAGK TTVGHLLAQE LGYGFLDTDN VIAQAAKKSI NEIFAEAGEA
GFRQIESDVL AQVCSYTKLT VATGGGIVLR RENWSYLHHG LIVWLDVSVD ILYARLAADT
TRPLLQDDDP KGKLRSLLEQ RTPLYSQADL RICVNAEETP EQIANKIMQV IPSVLKQTTA
N
|
|---|
| |