| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0542 |
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| Symbol | |
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| ID | 3682314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 683075 |
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| End bp | 686059 |
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| Gene Length | 2985 bp |
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| Protein Length | 994 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637715870 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_321061 |
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| Protein GI | 75906765 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4995] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.397005 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAAC AGCGTTTACA GGCTTATTAT CAGCTAATTC AAACCCTGCT AGATTGCCCT
AGTGGGGAAG AACCAGAGAT ATTAGCAGCG AATACAGAAT TGCTAGATGC TGACTTTGTG
CAGGTGGTAG GATTAGCAGC AGAGCATTTT GCCCAGCAGG GAGAAGAAAA TAGAGCCAAT
TGGTTGAGAA ACTTAGCAAC ATATCTCACC ACCCCAGAAA CGCCCCCCAT CACCGAAGCA
GATATAGAGA CTTACTCGCC ATTTATCTTA GAAGTATTGC GAGCAACAGC AGAAAGTAAC
GGCAATCCTG AAGTAATTTA CCTGTTGCTG GCAGCTAATA CCGATAAACT AAATCGTATC
TTTGCAGAAT TACTGCGCCG TTGGGCAACA AATACCTTAG CAGAAGCAGA ACCAGATACA
GCAACATCCA TCGCTAATGT GATTGGTAAC TTTAGTAATC TGATTCAGCA ATTTCCCTTG
GGTAGCAAAG CCAACAACAT GGAAATTGCC ATTACTGGCT ACGAAATCAT CCAAACTATT
TACACTCGCC CAGCCTATCC TGAAAAATGG GCAACGACGC AAAATAATCT GGCGACTGCT
TACTCTGACA GAATATTAGG AAACAGAGGG GAGAATCTGG AGGAGGCGAT CGCTGCTTAT
TCTGCGGCTC TGGAAGTTTA TACCCGCACT GATTTTCCTG TAGATTGGGC TGGAACGCAA
AATAATCTGG CGATTGCTTA CCGTAACAGA ATATTAGGAA ACAGAGGGGA GAATCTGGAG
AAGGCGATCG CTGCTTATTC TGCGGCTCTG GAAGTTTATA CCCGCACTGA TTTTCCTGAA
AAATGGGCAA CTATACAAAA TAATCTGGCG ACTGCTTACT TATACAGAAT ATTAGGAAAC
AGAGGGGAGA ATCTGGAGAA GGCCATCGCT GTTTATTCTG CGGCTCTGGA AGTTTATACC
CGCACTGATT TTCCTGAAAA ATGGGCAATG ACGCAAAATA ATCTGGCGAT TGCTTACTCT
GACAGAATAT TAGGAAACAG AGGGGAGAAT CTGGAGCAGG CGATCGCTGC TTATTCTGCG
GCTCTGGAAG TTTATACCCG CACTGATTTT CCTCAAAAAT GGGCAATGAC GCAAAATAAT
CTGGGGAATG CTTACCGTAA CAGAATATTA GGAAACAGAG GGGAGAATCT GGAGCAGGCG
ATCGCTGCTT ATTCTGCGGC TCTGGAAGTT TATACCCGCA CTGATTTTCC TCAAAAATGG
GCAATGACGC AAAATAATCT GGGGAATGCT TACCGTAACA GAATATTAGG AAACAGAGGG
GAGAATCTGG AGCAGGCGAT CGCTGCTTAT TCTGCGGCTC TGGAAGTTTA TACCCGCACT
GATTTTCCTC AAAATCATGC AGAAACTTTG TTTAATCTCG GCATACTATA CCAAGAAGAG
AAACAATTTA ACTTAGCTTA CGATACCTTT GCCCAAGCAA TAGCAACCGT CGAAGCTTTA
CGGGGTGAAA TTAATGCAGG TGATAATTTA GGTGAAGAAG GCAAGCGCAA ACAAGCAGAA
GAATGGAATA AACTTTATAG ACGCATGATA GAAGTTTGCC TAGCATTGGG CAAAGACACT
GAAGCGATAG AATATATTGA ACGCAGCAAA ACCCGCTATT TAGTAGAACT ATTAAGCAAA
GCAGACTCAA TCAATCAAAA AAATCTCCCT GATATAGACA GCAAAATCCG TTTTGCAGAA
ATTCAAAATC TTTTAGACGA TGAAACAGTT ATTATCCAAT GGTATATATT TACTGATTGT
TTTCGTGCCT TCATCATCAC TAAAAACCAT CAACCAATCA TTTGGCAATC AGCCTCAGAA
AATTTAGATA ATTTAGAAGA ATGGACTGAT AATTATCTGC AAATCTACGG TGAAGATAAA
CAAAAATGGC GATATCAGCT AAACGAGCAA CTAACCAAAC TCACTCAAAT CCTTCACCTC
AATGAGATAA TTTCTCTCAT CTCCTCCCAA TACAAAAAAC TGATTGTCAT TCCCCATCGT
TATTTACATT TATTCCCACT CCATGCTGTA CCCCTAGCTA ATAAACACTC ATCACAACCA
GAATATTTAT TTGATAGATT TCCTCATGGC GTAAGTTATG CACCAAGTAA TCAACTTTTA
CGATTTACTC AACGGCGATT GCAAAAATTA GCCAACTTAG AATTAAATCC CTTCAGTAAT
TTATTTGCCA TTCAAAACCC CACTAACGAT TTAGCCTTCA CCGATATTGA AGTGGAAACC
ATAGCCGCAG ATTTTCAACC CCAACAAATC CTCAAACATC ACCAAGCCAC CAAAGCCGCA
TTAACAGCAA CACCAACTAA TGAAACCCTC AGCAATTCCC AATGGCTGCA TTTCTCTTGT
CACGGTTACT TTAACTTCCG TTCCCCCTTA AAATCTGGTT TACAGTTAGC CGATGCAGTA
ACCTCTAACA TTCCCAGCAC CATCAACTCA TCACGCTACC TGAGAATTGA CAACGAAACA
GCAATAGATT TAGATAAATG CCTCACCCTA GAAGATATCT TTCAATTAAA CTTAAATAAC
TGTCGCCTCG TCTGTCTGTC CGCTTGCGAA ACTGGTTTTA TTGACTATAC AAATAGCAGC
GATGAATATA TAGGCTTGGC AAGTGGTTTT ATTCGTGCTG GTGCAACTAA CATGATTAGT
AGTTTATGGG CAGTTAGCGA CTTTCACACA GCTTTATTAA TGATTAAATT TTATGAAAAC
TTACCACTTT ATCAATATAA TGTGTCCTTA GCCTTGAACC ATACCCAAAC ATGGTTACGC
CGAGCAACGC AATCACAAAT TATAGACTGG GTGCAAAGTA AAACCAATAT GCAAAACACA
CAACAGCAAA AAATCATTGG CTTTTTACAA CAATATAAAC CTGAACAACA ACCATTTAAA
AGACCAGAAT TTTGGGCTGC TTTTTCTGCT ATTTCTCCAG TTTAG
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| Protein sequence | MNEQRLQAYY QLIQTLLDCP SGEEPEILAA NTELLDADFV QVVGLAAEHF AQQGEENRAN
WLRNLATYLT TPETPPITEA DIETYSPFIL EVLRATAESN GNPEVIYLLL AANTDKLNRI
FAELLRRWAT NTLAEAEPDT ATSIANVIGN FSNLIQQFPL GSKANNMEIA ITGYEIIQTI
YTRPAYPEKW ATTQNNLATA YSDRILGNRG ENLEEAIAAY SAALEVYTRT DFPVDWAGTQ
NNLAIAYRNR ILGNRGENLE KAIAAYSAAL EVYTRTDFPE KWATIQNNLA TAYLYRILGN
RGENLEKAIA VYSAALEVYT RTDFPEKWAM TQNNLAIAYS DRILGNRGEN LEQAIAAYSA
ALEVYTRTDF PQKWAMTQNN LGNAYRNRIL GNRGENLEQA IAAYSAALEV YTRTDFPQKW
AMTQNNLGNA YRNRILGNRG ENLEQAIAAY SAALEVYTRT DFPQNHAETL FNLGILYQEE
KQFNLAYDTF AQAIATVEAL RGEINAGDNL GEEGKRKQAE EWNKLYRRMI EVCLALGKDT
EAIEYIERSK TRYLVELLSK ADSINQKNLP DIDSKIRFAE IQNLLDDETV IIQWYIFTDC
FRAFIITKNH QPIIWQSASE NLDNLEEWTD NYLQIYGEDK QKWRYQLNEQ LTKLTQILHL
NEIISLISSQ YKKLIVIPHR YLHLFPLHAV PLANKHSSQP EYLFDRFPHG VSYAPSNQLL
RFTQRRLQKL ANLELNPFSN LFAIQNPTND LAFTDIEVET IAADFQPQQI LKHHQATKAA
LTATPTNETL SNSQWLHFSC HGYFNFRSPL KSGLQLADAV TSNIPSTINS SRYLRIDNET
AIDLDKCLTL EDIFQLNLNN CRLVCLSACE TGFIDYTNSS DEYIGLASGF IRAGATNMIS
SLWAVSDFHT ALLMIKFYEN LPLYQYNVSL ALNHTQTWLR RATQSQIIDW VQSKTNMQNT
QQQKIIGFLQ QYKPEQQPFK RPEFWAAFSA ISPV
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