Gene Ava_0533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0533 
Symbol 
ID3682363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp671335 
End bp672075 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content42% 
IMG OID637715861 
Productdienelactone hydrolase 
Protein accessionYP_321052 
Protein GI75906756 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAAATCA CTAAGCGCAA TGTGGAGTTG AGAGTAGATG ACAGTTTAAT GCGTGTTTAT 
GTCGCATCTC CAAAACCAGC AGGAGTTTAT CCAGGTATTG TATTTTATAG TGATATTTAT
CAGTTAGGTA GCCCAATAAT TCGTCTAGCT AACTACTTAG CTGGATTTGG TTACGTAGTA
GCAGCACCAG AGATTTTTCA TCGTCTTGAG CCAATTGGAC TAGTAATTGA ACCGGATGAT
CTTGGGAGAA TGCGGGGTAA TGATAATGCG CGACGAACTG CGATCGCTGA ATATGATGCA
GATTCTCGTG CTGTAATTGA TTTTCTCAAA GCGGAAAGCA CTGTTAATGC CGATAAAATT
GGTACCCTTG GTTTTTGTAT AGGTGGACAC TTAGCCTTTC GTGCAGCTTT TGAAACCGAA
GTTAAAGCCT CCGCCTGCTG CTACCCTACA GGGATTCCCA GTGGTAAGTT GGGTAAAGGA
GTAGCGGATA CTATCCACAG AGTCAAGGAA ATCACAGGGG AAATATTGCT AGTACTGGGT
ACACTTGATC CTCACATACC AGAAAGCGAT CGCCAAATTT TAATTAAAGC CATTGAAGAT
GCTAAAGTAC CTCACAAAGT AGTTTTATAT GAAGCAGAAC ATACCTTCAT GCGCGATGAC
GGTTATCGCT ACGATTCTGC TGCGACTACC TCTGCTTGGG CGGAAATAGT AGAATTTTTA
GGACGTGTAT TTGCTGATTA A
 
Protein sequence
MQITKRNVEL RVDDSLMRVY VASPKPAGVY PGIVFYSDIY QLGSPIIRLA NYLAGFGYVV 
AAPEIFHRLE PIGLVIEPDD LGRMRGNDNA RRTAIAEYDA DSRAVIDFLK AESTVNADKI
GTLGFCIGGH LAFRAAFETE VKASACCYPT GIPSGKLGKG VADTIHRVKE ITGEILLVLG
TLDPHIPESD RQILIKAIED AKVPHKVVLY EAEHTFMRDD GYRYDSAATT SAWAEIVEFL
GRVFAD