Gene Ava_0523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0523 
Symbol 
ID3682353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp658639 
End bp659631 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content44% 
IMG OID637715851 
Productsuccinate dehydrogenase iron-sulfur subunit 
Protein accessionYP_321042 
Protein GI75906746 
COG category[C] Energy production and conversion 
COG ID[COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit 
TIGRFAM ID[TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGTTC TATTTAAAAT CATTCGTCAA CAACAAAATT CTGCTCCTAT TGTGCAGAAT 
TACCTTATGG AGACAGACCC TGGTAATACT ATCTTAGATT GTCTTAATCG TATTAAGTGG
GAGCAAGACG GAACACTAGC ATTTCGTAAA AATTGCCGCA ATACTATTTG TGGTAGCTGT
GCCATGCGAA TTAATGGCCG TTCGGCTCTA GCTTGTAAAG AAAATGTAGG TAGTGAACTA
GCTAGATTAG AAAAAATATC ATCTTCAGCT AATCAAGCAA CTAACATTCC AGAAATTACG
ATCGCTCCTT TAGGCAATAT GCCAGTAATT AAGGATTTGG TCGTAGATAT GAATAGTTTC
TGGAATAATC TAGAAGCTGT TGCTCCCTAT GTAAGTACAG CAGCCAGACA AGTACCAGAA
CGGGAATTTT TACAAACACC AGATGAGCGA TCGCGCCTCG ATCAAACTGG TAATTGTATT
ATGTGCGGTG CGTGCTACTC AGAATGCAAT GCCCGTGAAG TCAACCCCGA CTTCGTCGGC
CCCCACGCCT TAGCTAAAGC CTACCGCATG GTTGCAGACT CCCGCGATAC TAGCACAGCC
GAACGCTTAG AAAGTTACAA CGAAGGCACT AAAGGTGTTT GGGGTTGTAC CCGTTGTCTT
TACTGCGATT CAGTTTGCCC AATGGAAGTA GCCCCATTAG AGCAAATTAC CAAAATCAAG
CAAGAAATAC TCAGCCAAAA ACAAGCCAGC GATAGCCGCT CAATTCGCCA CCGCAAGGTA
TTAGTAGAGC TAGTCAAAGA AGGCGGATGG ATTGACGAAC GGCAATTTGG CTTACAAGTA
GTCGGTAACT ATTTAAAAGA CCTCAGAGGA TTACTCAGCC TCGCTCCCCT GGGTTTACGA
ATGATTGCCA AAGGTAAATT TCCTCTATCC TTTGAAGCAT CTGAAGGGAC AGCCCAAGTG
CGATCGCTCA TCGAATCGAT ACAAAAGGAG TAA
 
Protein sequence
MEVLFKIIRQ QQNSAPIVQN YLMETDPGNT ILDCLNRIKW EQDGTLAFRK NCRNTICGSC 
AMRINGRSAL ACKENVGSEL ARLEKISSSA NQATNIPEIT IAPLGNMPVI KDLVVDMNSF
WNNLEAVAPY VSTAARQVPE REFLQTPDER SRLDQTGNCI MCGACYSECN AREVNPDFVG
PHALAKAYRM VADSRDTSTA ERLESYNEGT KGVWGCTRCL YCDSVCPMEV APLEQITKIK
QEILSQKQAS DSRSIRHRKV LVELVKEGGW IDERQFGLQV VGNYLKDLRG LLSLAPLGLR
MIAKGKFPLS FEASEGTAQV RSLIESIQKE