Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0522 |
Symbol | |
ID | 3682352 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 657981 |
End bp | 658499 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637715850 |
Product | WD-40-like beta propeller repeat-containing protein |
Protein accession | YP_321041 |
Protein GI | 75906745 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTAAAC GTATTTTTAT ATTTGCTTGT ACAACCTTAT TGGGTGGATG CTTTGGCTAT CCTCGGTTGG TAAGTTACCC TTTCGATCCT GGGGGAAGGA GTATTAATAG TCTTGCTTCA GAACTTAATC CTCAAATTTC GGGGCGATAT ATTGTGTTTA CAAGCGATCG CCGGGGTAGC CAAGATGTAT ATATGTTTGA TACGCTGACT CAAAATTTGG TAGATTTGCC TGGGTTAAAT GCTTTAGATA CGATCGCCTC TCATCCCAGT GCTTCGGCAG ATGGTCGTTA TGTAGTATTT GCTGCTAGTC GCCAAGGACG ATCAGCTATT TTTATTTATG ACAGAGAAAC ACGGCAATTA CGGAATTTGA CAAATAATTT ACAAGCAGAA GTCCGCAACC CCACCATTAG CGCTGATGGG AATGCGATCG CTTTTGAGTC TAGCAATAAT GGCCAGTGGG ATGTTTTAGT TTATAACCGT TCTGGGCAAC CCGTGAATGT GCCTCAAGAT CCCCGATGA
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Protein sequence | MIKRIFIFAC TTLLGGCFGY PRLVSYPFDP GGRSINSLAS ELNPQISGRY IVFTSDRRGS QDVYMFDTLT QNLVDLPGLN ALDTIASHPS ASADGRYVVF AASRQGRSAI FIYDRETRQL RNLTNNLQAE VRNPTISADG NAIAFESSNN GQWDVLVYNR SGQPVNVPQD PR
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