Gene Ava_0516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0516 
Symbol 
ID3682385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp650392 
End bp651735 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content48% 
IMG OID637715844 
Productacetyl-CoA carboxylase biotin carboxylase subunit 
Protein accessionYP_321035 
Protein GI75906739 
COG category[I] Lipid transport and metabolism 
COG ID[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit 
TIGRFAM ID[TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0701369 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTTG ACAAAATATT AATTGCCAAT CGGGGAGAAA TAGCGCTTCG CATTCTCCGC 
GCCTGTGAGG AAATGGGGAT TGCGACGATC GCAGTTCACT CGACTGTTGA CCGGAATGCT
CTTCATGTCC AACTTGCTGA CGAAGCGGTT TGTATTGGCG AACCTGCTAG CGCTAAAAGT
TATTTGAATA TTCCCAATAT TATTGCTGCG GCTTTAACGC GCAATGCCAG TGCTATTCAT
CCTGGGTATG GCTTTTTATC TGAAAATGCC AAATTTGCGG AAATCTGTGC CGACCACCAC
ATTGCGTTTA TCGGCCCTAC CCCAGAAGCT ATCCGCTTGA TGGGGGACAA ATCCACAGCC
AAGGAAACCA TGCAAAAGGC TGGTGTACCT ACAGTACCGG GTAGTGAGGG TTTGGTAGAG
ACGGAGCAAG AAGGATTAGA ACTGGCGAAA GATATCGGCT ACCCAGTAAT GATCAAAGCC
ACAGCTGGTG GTGGCGGCCG GGGTATGCGA CTGGTGCGAT CGCCAGATGA ATTTGTCAAA
CTTTTCTTAG CCGCCCAAGG TGAAGCAGGT GCAGCCTTTG GTAATGCTGG CGTTTATATT
GAAAAATTTA TTGAACGTCC GCGCCACATT GAATTTCAAA TTTTGGCTGA TAGTTACGGC
AATGTCATTC ACTTGGGTGA GCGGGATTGC TCAATTCAGC GCCGTAACCA AAAGTTACTA
GAAGAAGCCC CCAGTCCAGC CCTGGACTCA GACCTACGGG AGAAAATGGG ACAAGCTGCG
GTGAAAGCGG CTCAGTTTAT TAATTACACC GGGGCAGGTA CTATCGAGTT TCTTCTAGAT
AGATCCGGTC AGTTTTACTT TATGGAGATG AACACCCGGA TTCAGGTAGA ACATCCCGTA
ACTGAGATGG TTACTGGAGT GGATTTATTA GTTGAGCAAA TCAGAATTGC CCAAGGGGAA
AGACTTAGAC TAACTCAAGA CCAAGTAGTT TTACGCGGTC ATGCGATCGA ATGTCGCATC
AATGCCGAAG ACCCAGACCA CGATTTCCGC CCAGCTCCCG GACGCATTAG CGGTTATCTT
CCCCCTGGTG GTCCTGGTGT GCGGATTGAC TCCCACGTTT ACACCGATTA CCAAATTCCG
CCCTACTACG ATTCCCTAAT TGGTAAGTTG ATCGTTTGGG GACCTGATCG CGCTACTGCC
ATTAACCGCA TGAAACGCGC CCTCAGAGAA TGCGCCATCA CCGGATTACC TACAACAATT
GGGTTTCATC AAAGAATTAT GGAAAATACC CAATTTTTAC AAGGTAACGT GTCTACTAGC
TTTGTGCAGG AGATGAATAA ATAG
 
Protein sequence
MKFDKILIAN RGEIALRILR ACEEMGIATI AVHSTVDRNA LHVQLADEAV CIGEPASAKS 
YLNIPNIIAA ALTRNASAIH PGYGFLSENA KFAEICADHH IAFIGPTPEA IRLMGDKSTA
KETMQKAGVP TVPGSEGLVE TEQEGLELAK DIGYPVMIKA TAGGGGRGMR LVRSPDEFVK
LFLAAQGEAG AAFGNAGVYI EKFIERPRHI EFQILADSYG NVIHLGERDC SIQRRNQKLL
EEAPSPALDS DLREKMGQAA VKAAQFINYT GAGTIEFLLD RSGQFYFMEM NTRIQVEHPV
TEMVTGVDLL VEQIRIAQGE RLRLTQDQVV LRGHAIECRI NAEDPDHDFR PAPGRISGYL
PPGGPGVRID SHVYTDYQIP PYYDSLIGKL IVWGPDRATA INRMKRALRE CAITGLPTTI
GFHQRIMENT QFLQGNVSTS FVQEMNK