Gene Ava_0515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0515 
Symbol 
ID3682383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp649019 
End bp649648 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content46% 
IMG OID637715842 
Producthypothetical protein 
Protein accessionYP_321034 
Protein GI75906738 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG3161] 4-hydroxybenzoate synthetase (chorismate lyase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.228468 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACTGCTA CTTTTACTCC AAGCAACAAC TCAACATTGC CAGCCGGATG GCATCGCCTC 
ACTCCAATTT GGCAAGGTGG GGAAGAAGTA ATTAAACATA GTTTGCCTCA CACTCAGCTG
GCTCCAGCGT GGCAACTACT ACTTTTAGGT GATGGCTCAC CCACAAGGCA TTTAGAATTA
CTCACTGGTG AGCCAACAGA AGTCGATGTC ATTGATATGT CATTGATTGG TCTGGATTTA
GATAGTGCGC CGGATTTAAT CCAATCGGTT CCAGCGCCAA GACTGAGGCG ACAGGTATGG
CTACGTACAG CCTCTGGCCA ACGACTGGCC TATGCAACGT CATGGTGGGA AGCCAGTCAT
GTAGACGAGT ATTTGCAAAA CCGTTCATTA CCTATTTGGG CAAGTCTAGC TCGTCTTCGC
ACGGAGTTGT ATCGAGATGT GCGGGGAATT TATTACGGAA ATTCACAGGC CCTGCAATCA
GGTTTTGGAG TGGATGGCCC TTTTTGGGGT CGCCATTACC TGTTTTGGCA TCACGGTCAA
CCTTTAACCT TAATTTATGA AGTTTTTTCT CCGTATTTAA CAAAATACTT GGGGCCGATG
CAACTAAGTT CTATAAATGT CAAGGTATAA
 
Protein sequence
MTATFTPSNN STLPAGWHRL TPIWQGGEEV IKHSLPHTQL APAWQLLLLG DGSPTRHLEL 
LTGEPTEVDV IDMSLIGLDL DSAPDLIQSV PAPRLRRQVW LRTASGQRLA YATSWWEASH
VDEYLQNRSL PIWASLARLR TELYRDVRGI YYGNSQALQS GFGVDGPFWG RHYLFWHHGQ
PLTLIYEVFS PYLTKYLGPM QLSSINVKV