Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0505 |
Symbol | |
ID | 3682373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 629243 |
End bp | 636220 |
Gene Length | 6978 bp |
Protein Length | 2325 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637715832 |
Product | CheA Signal transduction histidine Kinases (STHK) |
Protein accession | YP_321024 |
Protein GI | 75906728 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.806325 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCCGG AACAACAACA GAGGATTTTA GGTTACTTTA TTGAAGAGGC GAGAGACCAC CTGAATACAA TCGAACAGGG GTTGCTCAAT CTTGAGAGTA CCTTAAACGA CCCGGAAATG ATCAACGAAG TTTTCCGGGC GGCTCACTCC ATTAAAGGAG GAGCAGCAAT GCTTGGTTTA ACTAGCATTC AGCACACTTC CCATCGTTTA GAAGATTGTT TCAAAATTCT TAAAGACAAT CCGGTTCAGG TTGACCAAAA ACTAGAGTCC TTATTTCTTG GGGTTTCTGA TACCCTAAAG GCGCTATTAG AACAGTTAAG CGGGCCGTTC GGTTTATCGG AAGAAGTTGC TAATACTTTG ATGTCGGAAA CTGAGCCAGT TTTTCAATGG CTACATGAGC ATTTGGAACA ACTGGTACAA AAAGGTGGCA CTGCTGAAAT TGGTGATCAT GCAGTAAGTA AGCCAAACAC AGCAGATAGT GTGGGTACAC TCACAGAAAT ATTCTTTCGC CAAGATGTTG CAACTCCAGC AGAAGCAACC CCCAAAACTT CTCCAGTTTT ACCAACCTAT TCTCCCATTG TTGCTACAGA TAGCGATCAG TGGAGCGAGT TTCAAGCCCA GGTTTTACAA ACTCTCAGGG AGATGTTGCA ACTATTTAAG CAACCAGCAA CACCAGCATC TCGGCAAAAT TTACAAGACT GCTGCAATCA GTTAGTCAAA CTCGGAAAAA CATGGAATTT GCCTAACTGG TGTAATCTAT GCAAAGCTGC AGCTAATGCG ATCGCTAATC AAGAAAATAC CTATCTGACT TTAGCTAAAA TTGTCATTAC AGAAATTAAA CAAGCTCAAG AATTAGTTCT GCGAAGTAGG GAATCTGAGA TTACAATTAG TCACCGACTG GAAGCACTCT GGGGTTTTCC AGAAATGCCC TTGTTAGAAG TAGCACAAAA TTTACTGGGT GATGTTCCCA CTGCTGTTAG TCAATCATTC ATAACACCAA TAACCCCCAC ATCTGAACCG ACAATTACTA ATAACGAAAT TAGTGCGCCT TTAATTGAAT CACCAACAGA CAGTGTAACT AGTTTCACTG AAATATCTGA CCAACTTTCT CCTCAAAGTG CCATAGCAGA AAGCATTGCG AACACGGATA TTGCATTTGA TCATGAAGAC CAAACAACCT ATACTACTAA TAAAATTCAT ACCCACGGGC CAGAAGTAGG ATTAGCTGAG TTAAATACTC TTGCTGACTT GTTTGAAGGT GAGACACCAG AACTCGATGA AACATGGCAA CAAGAAGAAA TTATTGATAT TAATAATGCT AGTAATTTAG GTGTGGATGT CAGCGAAAGT ACTGATGAAG CAATTGATAG TGATCTTGCT GATTTTCTAT CACTGGAAGA AGATAAAGAA GAGTCCGAGA AAACTATAAA TAATACAGAA GATTTAAGCT TACTTTTTGG AGAAAACTTC TTAGAGAAAA ATAATTTAGA ATCACTTGAT TTATTTAAAG CTCCTGTTAC TGCGGGTGAA ATAATACAAG AAGCTAGAGA TAATGCTAAT CAGTTGCCAG ATTCTGATGA TGTCATAGAT GATTTGTTGG CATTAAAAAT CGATGATGAA ATCCAGAATA GCAATGAATT AGAGCAGACA AACACCTCAA GCGATTTTGA TGATTTATTT TCAGATACAG AAACTAATCT ACCCACTAAT TCCGAGTTAC AGCTAATAGC ACTACCAGAA GACTTATCGC TAAATAACAT ATTTAATGAT TCAGAGGAAA ATAAGCAATT ATTAACTGAA AAATCAGAAA TTAGTGATTT ATTGGATTTA CCACCAGTAG ATAATTTAGG GAATCTATGG AACTCGGCAA CTGAAGTAGA ACCGGAGCAA ATATTAGAGT CTGTAATAGA AGAAGATATA GCCCAAGCTT TAGAGGAAAG TTTGTTTGAA GCTGCGGCTT CTGGAGACAT TTTCGTTGAA AATCGACAAT TTACATCACA TTTAAATGAA AGTTTAGATC CAGATGATCT AAATATCACT TTCTTACAGG ATGAACAGCA GTTAGATTTG CTATTCGCAT CAGATACAAG TGATGATTTA TTTGGGGAAT TAACTATAAA TACGCATGAT ACTCATAGGA TTGATGTTAT TAGTGATGAT ATCCAATTCT TAAGAGAAAT TAGTCAAGTT TCTCCACCTG AGATTCATGA TTTTTCACAG CAACCAGAAG TTTTAGATTT TACCCCTGAA TTTACTACGC AAATTCAAGA ACTATCTGCT ATTGATGATT TATCATCATT AACGAGCGAT TTAACAGATA TCACTTTTAC AGAAACGAAT GATTCTTCCA GTTTAGAAAC AGTTGCAGAA ACTAGTGAAC TAAGTTTAGA TGATGATTTA TCAGCATTAA ATAGTGATTT AACAGATATC ACTTTTACAG AAACGAATGA TTCTTCCAGT TTAGAAACAG TTGCAGAAAC TAACGAACTA GATTTGGATG ATGACTTATC AGCATTAAAT AGTGATTTAA CAGATATCAC TTTTGCAGAA ACACATGATT CTTCCAGTTT AGAAACAGTT GCGGAAACTA ACGAACTAGA TTTAGATGAT GACTTATCAG CATTAAATAG TGATTTAGCG GATATCACTT TTGCAGAAAC ACATGATTCT TCCAGTTTAG AAACAGTTGC GGGAACTAAC GAACTAGATT TAGATGATGA TTTATCAGCA TTAACTAGTG ATTTAGCGGA TATCACTTTT ACAGAAACGA ATGATTCTTC CAGTTTAGAA ACAGTTGCAG AAACTAGTGA ACTAAGTTTA GACGATGATT TATCAGCATT AACTAGTGAT TTAGCGGATA TCACTTTTAC AGAAACGAAT GATTCTTCCA GTTTAGAAAC AGTTGCAGAA ACTAGTGAAC TAAGTTTAGA CGATGATTTA TCAGCATTAA CTAGTGATTT AGCGGATATC ACTTTTACAG AAACGAATGA TTCTTCCAGT TTAGAAACAG TTGCAGAAAC TAGTGAACTA AGTTTAGACG ATGATTTATC AGCATTAACT AGTGATTTAG CGGATATCAC TTTTACAGAA ACGAATGATT CTTCCAGTTT AGAAACAGTT GCAGAAACTA GTGAACTAAG TTTAGACGAT GATTTATCAG CATTAACTAG TGATTTAACA GATATCACTT TTACAGAAAC GAATGATTCT TCCAGTTTAG AAACAGTTGC GGAAACTAAC GAACTAGATT TAGATGATGA CTTATCAGCA TTAAATAGTG ATTTAGCGGA TATCACTTTT GCAGAAACAC ATGATTCTTC CAGTTTAGAA ACAGTTGCGG GAACTAACGA ACTAGATTTA GATGATGATT TATCAGCATT AACTAGTGAT TTAGCGGATA TCACTTTTAC AGAAACGAAT GATTCTTCCA GTTTAGAAAC AGTTGCAGAA ACTAGTGAAC TAAGTTTAGA CGATGATTTA TCAGCATTAA CTAGTGATTT AGCGGATATC ACTTTTACAG AAACGAATGA TTCTTCCAGT TTAGAAACAG TTGCAGAAAC TAGTGAACTA AGTTTAGACG ATGATTTATC AGCATTAACT AGTGATTTAG CGGATATCAC TTTTACAGAA ACGAATGATT CTTCCAGTTT AGAAACAGTT GCAGAAACTA GTGAACTAAG TTTAGACGAT GATTTATCAG CATTAACTAG TGATTTAGCG GATATCACTT TTACAGAAAC GAATGATTCT TCCAGTTTAG AAACAGTTGC AGAAACTAGT GAACTAAGTT TAGACGATGA TTTATCAGCA TTAACTAGTG ATTTAACAGA TATCACTTTT ACAGAAACGA ATGATTCTTC CAGTTTAGAA ACAGTTTCAG AAACTAGTGA ACTAAGTTTA GACGATGATT TATCAGCATT AACGAGTGAT TTAACAGATA TCACTTTTAC AGAAACGAAT GATTCTTCCA GTTTAGAAAC AGTTTCAGAA ACTAGTGAAC TAAGTTTAGA CGATGATTTA TCAGCATTAA CGAGTGATTT AACAGATATC ACTTTTGCAG AAACACATGA TTCTTCCAGT TTAGAAACAG TTGCAGAAAC TAGTGAACTA AGTTTAGATG ATGATTTATC AGCATTAAAT AGTGATTTAA CAGATATCAC TTTTGCAGAA ACGAATGATT CTTCCAGTTT AGAAACAGTT GCAGAAACTA GTGAACTAAG TTTAGACGAT GATTTATCAG CATTAACTAG TGATTTAGCG GATATCACTT TTACAGAAAC GAATGATTCT TCCAGTTTAG AAACAGTTGC AGAAACTAGT CAACTAAGTT TAGATGATGA TTTATCAGCA TTAAATAGTG ATTTAACAGA TATCACTTTT GCAGAAACGA ATGATTCTTC CAGTTTAGAA ACAGTTGTCG AAACTAACGA ACTAGATTTG GCTGATGATT TATCGGCTTT AACCTTAGAT GAGTTAATCA CGGAAAATCA CAACTTTATA AGTATTGCGG TTGATGACAA TACCTTATCT ACCTCAGAAT TTAGCGAATT GGGGTTATCT CTGACAAATG ATGAAAATCC AGAAGATATT GCAGATTCAT CAGGGCTTTT AATAGATATA AATCCAGCCA CGGAAGATGT AGCCGGGGTT GAAGTAGAGA ATGTGGTTTC TACTTCAATA GATATCCCAG AATCAGTCAA GTCAGATACT TATATTCAAG ATGATTTTGC TGATTTAGAA GCATTGTTAG AAATAGAAGA ACCTACATTC AGTGCTGATA ATGACTCCAT AGCAGGAGAT GATTTTGCTG CTTTAGAAGC ACTTCTGGGT GAAGACAATC CGGAAACAGC ACTGGATGAG CCACCTGCTT TAGCTAAAAT CATCAAAACT ACTCCTACTG TTTCCGTAAC ACCAGCGCCG TTGGCAGATG AATTTAGTGA TCTGGAGAAA CTTTTAGCAG AAGCAGACCA AACCATCTCC CATTCATCAC CAGTCAAACC AACGGTAGGA AAAACTCCAC GTACTTCTAA TCGACGGACT GCGAGATTTG AAGAAACGAT GAAAGTGCCG GTCAAGCAGT TGGATGAAAT GAGCAATTTG GTCGGTGAAC TAGTAGTCAA CCGCAACACC TTAGAGCAGG ATCATGAACG ACTGCGACAA TCATTAGATA ACTTGCTAGT TCAGGTGCAA CAACTCTCAG ACGTGGGTGC AAGGATGCAG GAATTATATG AGCGATCGCT CTTAGAAGCT TCTTTATTAG CTAGTCGCAA AACTAGAGAG CCTGTCTACG AAGTACCGGA TGCGAATAGC GATCGCGGTT TTAGCGAATT AGAAATGGAT CGCTTTACTC CCTTCCACAC ACTGTCTCAG GAAATGATTG AATTGATTGT CAGGGTGCGG GAGTCAGCGA GTGACATTGA TTTCGTCACT GAAGAAACCG AACGAGTAGC CAGACAATTC CGTCAAGTGA CCACTCAACT GCAAGAAGGT CTGACACGCG CCCGCATGGT GCCATTTTCC CAGACAATTG ACCGCTTGCG GCGGGGAGTG CGCGACAACG CCATCAAGTT TGGTAAACAG GTGGAATTAG TGATTGAAGG TGGCGATACC CTCATTGACA AGATGATTTT AGATCATCTC AATGACCCAC TAACCCATAT GCTCAACAAT GCGATCGCTC ACGGTATTGA AACCCCAGAA ATTAGGGAAG CATCTGGCAA ACCACCCGTG GGAACCATTA CTATCCGCGC CTTTCACCAG GGGAATCAAA CTGTAATTTC TGTAGGAGAT GACGGTGCAG GAATTGATCC CGAACGCATC AAAGCCAAAG CAGTGAAGCT GGGGATTATG ACACCAGAAC AGGCTAGAAC TATTTCTCGC CTGGAAATTT ATGACCTACT ATTCCAGTCT GGTTTTAGTA CCAAAGATGA AGCCGATGAA ATTGCTGGTC GTGGTGTGGG AATGGATGTG GTGCGTTCCG AAATTAGTGA AATTCGCGGG GCGGTAAATA CAGATTCTAC TGTTGGCAAG GGAACCACCT TCACGATTCG TCTACCATTA ACCTTGAGTA TTTGTAAGGC TCTGTGCTGT GTTTCTGATA AAGCACGGAT TGCCTTTTCA ATGGATGGTG TGGAAGATAC CCTAGATATA CCCAGCAAAA ACGTCCAACA TAACGCTGAT GGACAATCAT TCATCTCTTG GCGGGATACG GTTTTACCTT TCCGACCATT GAAAGAACTG TTAACCTTCA ATCGTCAACT CGGTCGCGGT AATGTCTACG GTGGTACTAG AGATGATGAT ATGATTTCCG TCGTCGTTGT GCGATCGGGT AATACTTTAA TCGCTCTCCA GATTGACCAA GTATTGAGTG AGCAAGAAAT TGTTATTAAA CAATTTGAAG GCCCAGCACC TAAACCAATA GGTGTAGCAG GGGCTACGGT CTTGGGCGAT GGTCGCATTA TGCCCATTGC TGATGTACTA GAAATTATCG ACATCTTCCA AGGACGGATG TCCAAACACG CTGGTGGCGC ACCTTGGCAA CAAACACCAC CAATTGCGAT CGAAATCCCA TCTGTGAAGA TTGACCCAAC TGTGCTGATT GTAGATGACT CGATCACAGT CCGAGAGTTG TTGTCCCTCA CCTTTAATAA AGCGGGTTAT CGCGTTGAAC AAGCTCGTGA TGGTCAAGAG GCTTGGGACA AACTCCGTTC CGGTCTGCCT TGTGATATCG TCTTCTGCGA TATTGAAATG CCCCGTTGCG ACGGACTAGA GTTACTCTCA CGTATTCAGA AAGACTCCAC CCTTAACCAT TTACCCATTG CTATGCTCAC CTCAAGAGGT GCAGATAAAC ACAGACAGAT GGCAATTCAA CTCGGTGCTA GTGGATACTT TACTAAGCCT TACCTAGAAG AGGCTTTACT AGAAGCCGCA GTGCGGATGT TGAAAGGTGA GAAGTTAGTC AGTCAAATAA ACGCTTAA
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Protein sequence | MLPEQQQRIL GYFIEEARDH LNTIEQGLLN LESTLNDPEM INEVFRAAHS IKGGAAMLGL TSIQHTSHRL EDCFKILKDN PVQVDQKLES LFLGVSDTLK ALLEQLSGPF GLSEEVANTL MSETEPVFQW LHEHLEQLVQ KGGTAEIGDH AVSKPNTADS VGTLTEIFFR QDVATPAEAT PKTSPVLPTY SPIVATDSDQ WSEFQAQVLQ TLREMLQLFK QPATPASRQN LQDCCNQLVK LGKTWNLPNW CNLCKAAANA IANQENTYLT LAKIVITEIK QAQELVLRSR ESEITISHRL EALWGFPEMP LLEVAQNLLG DVPTAVSQSF ITPITPTSEP TITNNEISAP LIESPTDSVT SFTEISDQLS PQSAIAESIA NTDIAFDHED QTTYTTNKIH THGPEVGLAE LNTLADLFEG ETPELDETWQ QEEIIDINNA SNLGVDVSES TDEAIDSDLA DFLSLEEDKE ESEKTINNTE DLSLLFGENF LEKNNLESLD LFKAPVTAGE IIQEARDNAN QLPDSDDVID DLLALKIDDE IQNSNELEQT NTSSDFDDLF SDTETNLPTN SELQLIALPE DLSLNNIFND SEENKQLLTE KSEISDLLDL PPVDNLGNLW NSATEVEPEQ ILESVIEEDI AQALEESLFE AAASGDIFVE NRQFTSHLNE SLDPDDLNIT FLQDEQQLDL LFASDTSDDL FGELTINTHD THRIDVISDD IQFLREISQV SPPEIHDFSQ QPEVLDFTPE FTTQIQELSA IDDLSSLTSD LTDITFTETN DSSSLETVAE TSELSLDDDL SALNSDLTDI TFTETNDSSS LETVAETNEL DLDDDLSALN SDLTDITFAE THDSSSLETV AETNELDLDD DLSALNSDLA DITFAETHDS SSLETVAGTN ELDLDDDLSA LTSDLADITF TETNDSSSLE TVAETSELSL DDDLSALTSD LADITFTETN DSSSLETVAE TSELSLDDDL SALTSDLADI TFTETNDSSS LETVAETSEL SLDDDLSALT SDLADITFTE TNDSSSLETV AETSELSLDD DLSALTSDLT DITFTETNDS SSLETVAETN ELDLDDDLSA LNSDLADITF AETHDSSSLE TVAGTNELDL DDDLSALTSD LADITFTETN DSSSLETVAE TSELSLDDDL SALTSDLADI TFTETNDSSS LETVAETSEL SLDDDLSALT SDLADITFTE TNDSSSLETV AETSELSLDD DLSALTSDLA DITFTETNDS SSLETVAETS ELSLDDDLSA LTSDLTDITF TETNDSSSLE TVSETSELSL DDDLSALTSD LTDITFTETN DSSSLETVSE TSELSLDDDL SALTSDLTDI TFAETHDSSS LETVAETSEL SLDDDLSALN SDLTDITFAE TNDSSSLETV AETSELSLDD DLSALTSDLA DITFTETNDS SSLETVAETS QLSLDDDLSA LNSDLTDITF AETNDSSSLE TVVETNELDL ADDLSALTLD ELITENHNFI SIAVDDNTLS TSEFSELGLS LTNDENPEDI ADSSGLLIDI NPATEDVAGV EVENVVSTSI DIPESVKSDT YIQDDFADLE ALLEIEEPTF SADNDSIAGD DFAALEALLG EDNPETALDE PPALAKIIKT TPTVSVTPAP LADEFSDLEK LLAEADQTIS HSSPVKPTVG KTPRTSNRRT ARFEETMKVP VKQLDEMSNL VGELVVNRNT LEQDHERLRQ SLDNLLVQVQ QLSDVGARMQ ELYERSLLEA SLLASRKTRE PVYEVPDANS DRGFSELEMD RFTPFHTLSQ EMIELIVRVR ESASDIDFVT EETERVARQF RQVTTQLQEG LTRARMVPFS QTIDRLRRGV RDNAIKFGKQ VELVIEGGDT LIDKMILDHL NDPLTHMLNN AIAHGIETPE IREASGKPPV GTITIRAFHQ GNQTVISVGD DGAGIDPERI KAKAVKLGIM TPEQARTISR LEIYDLLFQS GFSTKDEADE IAGRGVGMDV VRSEISEIRG AVNTDSTVGK GTTFTIRLPL TLSICKALCC VSDKARIAFS MDGVEDTLDI PSKNVQHNAD GQSFISWRDT VLPFRPLKEL LTFNRQLGRG NVYGGTRDDD MISVVVVRSG NTLIALQIDQ VLSEQEIVIK QFEGPAPKPI GVAGATVLGD GRIMPIADVL EIIDIFQGRM SKHAGGAPWQ QTPPIAIEIP SVKIDPTVLI VDDSITVREL LSLTFNKAGY RVEQARDGQE AWDKLRSGLP CDIVFCDIEM PRCDGLELLS RIQKDSTLNH LPIAMLTSRG ADKHRQMAIQ LGASGYFTKP YLEEALLEAA VRMLKGEKLV SQINA
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