Gene Ava_0499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0499 
Symbol 
ID3682406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp622358 
End bp623206 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content46% 
IMG OID637715826 
Producthypothetical protein 
Protein accessionYP_321018 
Protein GI75906722 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.620209 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCACT TGCTGATGAT TTTGACAGCT GTGGTGGTTT CGTGGATTTT CAGAAGTTAT 
TGGACTAACC CCCAAGACAA TTGGGATACG CGGTGGCAAA GAACTTTGCT TTTCTTTCTG
TTTCCACCAT TGTTAATTTT GATGACAGCG ATCGCGCTCT TATTTATGGG GCCGCAAGGC
AAAATGGGAG GCCTGTACAC AGGTTGGTTC AGCTACGCGC TAGCTTTAAC CTTTCTGGCA
ATTTTTTCTG GTTTGTGTGT CACACGAGCT ATTCAAGGCT GGCGATCGCT ACAATCCGCC
CGTCATTGCC CTTTAGTTCA TCTTGAAGGT AAACAAGTCA GGCTACTCAA CACAGCAGCC
CTATTTGCTG GACAAATTGG TTTCTGGCAA CCAGAACTAG TAGTTAGTCA AGGATTACTG
CAAACACTTT CTCCCAACCA CGTAGAAAGC GTTCTTGCCC ACGAACAAGG ACATTTTTAT
TATCGGGACA CCTTTTGGTT TTTCTGGCTG GGTTGGGTGC GTTCTTGCAC CGCTTGGCTA
CCCAATACCG ATGCTTTGTG GCAAGAACTT TTAGTTTTGC GCGAACTCCG TGCAGATAGT
TACGCCGCAT CCCAAGTTGA TCCCCTGGTA CTAGCAGAAT CACTTTTATT AGTGGTTAGT
AATGGTTCTG CATTTTCACA ATCAGAAATT TGTTGTGCAG CTTTGGGTGA TAGTGTAGGC
GATCGCTTGG AACAAAGAAT AGAAGCCCTG TTATCACCAC CAAATCATAC CCCAGAAGCC
CAATTCCCGT CTTGGCACGG TTTTATTTTG GCGCTGCTGC CCTTAGTAAC TGTCATATTT
CACACTTGA
 
Protein sequence
MMHLLMILTA VVVSWIFRSY WTNPQDNWDT RWQRTLLFFL FPPLLILMTA IALLFMGPQG 
KMGGLYTGWF SYALALTFLA IFSGLCVTRA IQGWRSLQSA RHCPLVHLEG KQVRLLNTAA
LFAGQIGFWQ PELVVSQGLL QTLSPNHVES VLAHEQGHFY YRDTFWFFWL GWVRSCTAWL
PNTDALWQEL LVLRELRADS YAASQVDPLV LAESLLLVVS NGSAFSQSEI CCAALGDSVG
DRLEQRIEAL LSPPNHTPEA QFPSWHGFIL ALLPLVTVIF HT