Gene Ava_0493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0493 
Symbol 
ID3682400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp613883 
End bp614881 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content45% 
IMG OID637715820 
Producttransaldolase B 
Protein accessionYP_321012 
Protein GI75906716 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0176] Transaldolase 
TIGRFAM ID[TIGR00874] transaldolase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.466389 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.164229 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAAA ATCTACTAGA ACAATTGCGA GAAATGACTG TAGTAGTTGC TGACACAGGT 
GATATTCAAG CAATTGAAAA GTTTACACCC CGCGACGCTA CCACCAATCC TTCTCTGATT
ACGGCAGCCG CTAAAATGCC AGAATATCAG GAAATTGTTG ATCAAACCTT ACTCCAAGCT
AAAAAAGACG CAGGCGCAGG AGCTAGCAAA GGCCAAATTG TCTCCCTTGC TTTTGACCGT
CTGGCGGTAT CCTTTGGATT GAAAATTTTA CAAATTATCC CTGGTCGCGT TTCTACAGAA
GTAGATGCCC GCTTGTCCTA CGATACTGAA GCTACTATCA CCAAAGCACG AGAATTAATC
GCTCAATACA AAGCGGCTGG TATTGGCCCA GAACGTGTTT TGATTAAAAT TGCCTCTACT
TGGGAAGGGA TCAAGGCTGC GGAAATTTTG GAAAAAGAAG GTATTCACTG TAACTTAACA
TTATTGTTTG GTTTGCATCA GGCGATCGCC TGTGCCGAAG CCGGTATCAC CTTAATTTCT
CCCTTCGTCG GCCGCATTCT CGACTGGTAC AAGAAGGAAA CCGGACGTGA TAGCTACCCC
TCTGCGGAAG ACCCTGGTGT AATTTCTGTT ACCACGATTT ACAACTACTA TAAGAAGTTC
GGCTACACCA CCGAAGTTAT GGGAGCTAGT TTCCGTAATA TTGGTGAAAT TACTGAGCTT
GCAGGTAGCG ACTTGCTGAC AATCTCCCCT GGTTTGTTGG GTGAACTACA AGCCACAATT
GGTGAGCTAC CCCGCAAACT CGACCCAGCA AAAGCAGCAA CTTTGGATAT AGAAAAGATT
TCCATCGATA AAGCTACCTT TGACAAGATG CACGCTGCTG ACCGCATGGC CTATGACAAA
CTAGACGAAG GTATCAAAGG TTTTACCAAA GCTCTAGAAG AGTTAGAAAC ACTACTAGCA
GAAAGACTAG CTCGTCTAGA AGTAGTAGCA AGTCACTAG
 
Protein sequence
MTKNLLEQLR EMTVVVADTG DIQAIEKFTP RDATTNPSLI TAAAKMPEYQ EIVDQTLLQA 
KKDAGAGASK GQIVSLAFDR LAVSFGLKIL QIIPGRVSTE VDARLSYDTE ATITKARELI
AQYKAAGIGP ERVLIKIAST WEGIKAAEIL EKEGIHCNLT LLFGLHQAIA CAEAGITLIS
PFVGRILDWY KKETGRDSYP SAEDPGVISV TTIYNYYKKF GYTTEVMGAS FRNIGEITEL
AGSDLLTISP GLLGELQATI GELPRKLDPA KAATLDIEKI SIDKATFDKM HAADRMAYDK
LDEGIKGFTK ALEELETLLA ERLARLEVVA SH