Gene Ava_0475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0475 
Symbol 
ID3682441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp598874 
End bp599557 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content45% 
IMG OID637715802 
Producthypothetical protein 
Protein accessionYP_320994 
Protein GI75906698 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.770893 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0933349 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGTTC CACTGACTCG CCAGAAATTT GAACAACTAA TTCCTTTAAT TGCCACTGGC 
CCGCAGTATA AGTACTACTG GGGAAAGTTT TCCAATTTTT TGCAGCGCCT ACTAGCTTCT
GTAGTATCCG TAGTTGTGAT TCTCCTGATT AGGTCAGTTT TTCGCTTAGA GTTTGGCCTT
ATCGTCTTCT TCTTGGGTGT ATTCGCCGCC TTTTTTTGGA TGTGGTATCC CGTACTTCAG
GCTAGCCTAC GCAATGCAAA ATGCCGCCGT TACAAGTACA GTGGCTTTTT CCGTGGGCGA
ATTTTGGATT GGTGGATTAC AGATAAGTTG ATGGGTAAAC AAGAAACAGT CAACAGCAAA
GGCGAATTGG TAATTGTCGA AAACAGAGAA AAACGGATAA ATATTGAGGT AGGCGACGAT
ACAGGATTTA GTGTCGAGTT AGAAGCACCA CTACGTCCTG TCCATAAAGC CATTGCCCGT
GGTCAAATTG CTGAGATGAT TGTCTTATCA AATCGTCCTG ATTTGAGCAG AATCGAAGAA
TTTAGCGATG TTTATATCCC CAGCCGCGAC ATCTGGGTAA ACGACTATCC CTATCTACGC
AGGGATTTCT TTAACGAAGT CAGCAGCCGT TTACGCCCAG ACCGACAAGA TAAACCACGC
CGCAGACGCA GAACACAGGA GTAG
 
Protein sequence
MLVPLTRQKF EQLIPLIATG PQYKYYWGKF SNFLQRLLAS VVSVVVILLI RSVFRLEFGL 
IVFFLGVFAA FFWMWYPVLQ ASLRNAKCRR YKYSGFFRGR ILDWWITDKL MGKQETVNSK
GELVIVENRE KRINIEVGDD TGFSVELEAP LRPVHKAIAR GQIAEMIVLS NRPDLSRIEE
FSDVYIPSRD IWVNDYPYLR RDFFNEVSSR LRPDRQDKPR RRRRTQE