Gene Ava_0473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0473 
Symbol 
ID3682439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp597150 
End bp597932 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content39% 
IMG OID637715800 
ProductABC transporter-like 
Protein accessionYP_320992 
Protein GI75906696 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.492847 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.175391 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAAC TCGATATTTC TGGATTTAAA TCGCCGATGA ACGCAGATGA AAGCCGATAT 
AAAAATGGAC ACGATTTTAA AATTTTAGAA ATTCAGGAAC TTGATGTTAA CTATGGCGGT
ATTCAAGCTC TGAAAAAGAT TAATTTAACT ATTCAAAAAG GTGAGGTTGT TACATTAATT
GGTGCGAATG GTGCAGGTAA AAGTACAACA TTAAGGGCGA TATCGAAGAT AGTTACTCCT
AAAAATGGGC AAATTATTTA TAGTGGACGT AATATTACAC GCCGTCTACC CCATGAAGTT
GTGAAGTTTG GTATTGCCCA TTGTCCAGAA GGGCGGAGGG TATTGGCAAA GCAAACTGTT
TTAGATAATT TACTCTTGGG TGCATATATT CGCTTCAATC AAACAGAGAT TAAAGCCGAT
ATTAAACAAC AATTTGAATT GTTCCCCAGG CTAGCACAAC GACAAAATCA ACTAGCGGGA
ACTCTCAGTG GAGGAGAACA GCAAATGTTG GCGATCGCTC GTGCTTTAAT GAGTAGACCA
CAACTTTTAC TTTTAGATGA GCCTAGCTTG GGTTTAGCAC CTGCGATAGT TAAGGAAATA
TTCTCGATTA TTGAAAATCT GCGTGCCACT GGTGTGACTA TTTTACTTGT GGAACAGAAC
GCCAATTTAG CTCTACAAAT CGCTGATAGA GGATATGTTT TAGAAGCTGG CTCTATTACC
TTATCAGGTG CGGCATCCAA CTTAATTAAT GATGAGCGCG TGAAAAAAGC CTACTTGGGT
TAA
 
Protein sequence
MSELDISGFK SPMNADESRY KNGHDFKILE IQELDVNYGG IQALKKINLT IQKGEVVTLI 
GANGAGKSTT LRAISKIVTP KNGQIIYSGR NITRRLPHEV VKFGIAHCPE GRRVLAKQTV
LDNLLLGAYI RFNQTEIKAD IKQQFELFPR LAQRQNQLAG TLSGGEQQML AIARALMSRP
QLLLLDEPSL GLAPAIVKEI FSIIENLRAT GVTILLVEQN ANLALQIADR GYVLEAGSIT
LSGAASNLIN DERVKKAYLG