Gene Ava_0467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0467 
Symbol 
ID3682433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp593116 
End bp593718 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content34% 
IMG OID637715796 
Producthypothetical protein 
Protein accessionYP_320988 
Protein GI75906692 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.102146 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0933349 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCAA TCGCAGGACA AAAATTAACC TTTGATCAAT TTCTCGATAA ATGTCCAGAG 
GAAGGTTTTT ATGAGCTTGT AAATGGAGAA ATTATAGAAG TGCGTTCAAC TAGAAATCAT
GATGATGTTG CTAATTATTT ATTGTTTGCT TTTAATGATG AAATTAGGCG ATTAAATTTA
AATTACATAG TCAACAATAC AGCAGTTTTT AGAACTAAAA CTGCTGATGG CATAGAACAA
GGGCGCAAAC CAGATGTTAG TGTAATTGAT AGGGACTTAT GGCGGTCAAA TCGTTCAGCC
TATTCTGCAC TTGAGCAACC AATTCAATTG GCTGTAGAGG TAACATCAAC TAATTGGGAA
GATGACTATA TTGATAAGTT AGATGAATAT CAAAGATTAG GTATTCAAGA ATATTGGATT
GTCGATTATT TAGCAATTGG AGACAGAAAA TATTTAGGAA CACCAAAAGA GCCGACTGTA
TTTGTTTTTC TATTAAATAC TAATGGCAAC TATGAGCGCA CATCTTTTAA AGGTTCTGAG
CGTATCATAT CAGTCACCTT TCCTGAACTA ACATTAACCG CAGAGCAAAT ATTAACCGCT
TAA
 
Protein sequence
MTAIAGQKLT FDQFLDKCPE EGFYELVNGE IIEVRSTRNH DDVANYLLFA FNDEIRRLNL 
NYIVNNTAVF RTKTADGIEQ GRKPDVSVID RDLWRSNRSA YSALEQPIQL AVEVTSTNWE
DDYIDKLDEY QRLGIQEYWI VDYLAIGDRK YLGTPKEPTV FVFLLNTNGN YERTSFKGSE
RIISVTFPEL TLTAEQILTA