Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0437 |
Symbol | |
ID | 3682598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 557186 |
End bp | 558352 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637715766 |
Product | aromatic amino acid beta-eliminating lyase/threonine aldolase |
Protein accession | YP_320958 |
Protein GI | 75906662 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
TIGRFAM ID | [TIGR03402] cysteine desulfurase NifS |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00696357 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.223385 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTAATC GTCCTATATA TCTTGATTGT CACGCTACCA CACCTCTAGA TGAACAAGTA TTAGCAGCAA TGCTACCTTA CTTTACGGAA AAATTTGGCA ACCCGGCTAG TATCGGCCAT ATTTATGGTT GGGAAGCAGA GGCGGCTGTG AAACAAGCAC GGGAAATTTT AGCAGCAGCA ATTAACGCTA GTCCAGAAGA AATTGTCTTT ACTAGTGGGG CTACAGAAGC GAATAATTTA GCGATTAAAG GTGTGGCTGA GGCTTATTTT CAAAAAGGTC AGCATATTAT CACTGTTGCC ACTGAACATC ATGCTGTACT TGACCCTTGT GAATATTTAA AAACCCTTGG TTTTGAGATA ACTATTTTGC CAGTCCAAGC AGATGGATTA ATTGATTTAG CCCAATTAGA AAAAGCGTTG CGTCCTGAGA CAATTTTAGT ATCGGTGATG GCGGCTAATA ACGAAATTGG GGTGTTGCAA CCTTTGGCAG AAATTGGGGA AATATGCCGC AGTCACAATA TAATTTTTCA CACAGATGCA GCCCAAGCTA TTGGCAAAAT TCCTCTCGAT GTGCAAGCGA TGAACATCGA TTTGATGTCT CTGACAGCCC ACAAAGTTTA CGGGCCTAAG GGTATTGGTG CATTATACGT CCGCAGGCGC AATCCCAGAG TCCAACTCGC ACCCCAGCAG CATGGCGGCG GACATGAACG GGGAATGCGT TCTGGGACGT TGTATACACC GCAAATTGTC GGTTTTGCCA AAGCTGTAGA AATCGCCCTC GCAGAACAGA CAATGGAAAA TCAGCGCCTT ACCCAGCTAA GGGATAGATT GTGGTCACAA CTTGCACAAT TGGAAGGAAT ACACCTCAAC GGACATCCCA CCCAGAGACT AGCCGGAAAC TTGAATATCA GCATTGAAGG GGTGGACGGT GCTGCACTCC AGTTGGGTTT ACAGCCTGTT GTGGCGGTGT CTTCTGGTTC TGCTTGTTCC TCCACCAAAA CTGCGCCCTC CCACGTCCTC ACAGCTTTAG GAAGTCCAGA AAAACTAGCC TATGCTTCTA TTCGCTTCGG TATTGGACGC TTTAATACAG CAGAAGAAAT TGATATAGTA GCGAAATATG CGATCGCTAC TATTCAAAGT TTACGTAAAC AAGCAAGTTT GGTATAG
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Protein sequence | MSNRPIYLDC HATTPLDEQV LAAMLPYFTE KFGNPASIGH IYGWEAEAAV KQAREILAAA INASPEEIVF TSGATEANNL AIKGVAEAYF QKGQHIITVA TEHHAVLDPC EYLKTLGFEI TILPVQADGL IDLAQLEKAL RPETILVSVM AANNEIGVLQ PLAEIGEICR SHNIIFHTDA AQAIGKIPLD VQAMNIDLMS LTAHKVYGPK GIGALYVRRR NPRVQLAPQQ HGGGHERGMR SGTLYTPQIV GFAKAVEIAL AEQTMENQRL TQLRDRLWSQ LAQLEGIHLN GHPTQRLAGN LNISIEGVDG AALQLGLQPV VAVSSGSACS STKTAPSHVL TALGSPEKLA YASIRFGIGR FNTAEEIDIV AKYAIATIQS LRKQASLV
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