Gene Ava_0435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0435 
Symbol 
ID3682596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp555944 
End bp556423 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content40% 
IMG OID637715764 
ProductAlkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_320956 
Protein GI75906660 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000831431 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.315945 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAACT TTCCCCAAGC CGGACAGCCA GCACCCGATT TCTCAACTCC TGACCAGAAC 
GGTAATTTAG TTAGCCTGAA TGATTTTCAT GGTCAATGGG TTGTGATATA TTTCTACCCC
AAAGATGATA CCCCTGGATG TACCACAGAA GCCAAAGATT TCACAGGTTT ACATGAGGAA
TTTCATCGAT TAGGAGCCAA AATCTTAGGA GTTAGTCCCG ACTCTGGTAA GGCACACTGC
AAATTTATTG ACAAACATAA TTTATCGATT ACCCTATTAA GTGACCCAGA ACATCAACTC
ATAGAAGCCT ATGGTGCTTG GCGCTTAAAG AAATTTATGG GCAAAGAATA TATGGGTGTA
GCGCGCTCAA CTTTTTTGAT ATCAACTGAT GGCATCATCG CCTATACTTG GCCTAACGTC
AAAACTAAAG GTCATGCTCA AGCGGTATTA AATAAGTTGC AAGAATTAAC TAATAGTTGA
 
Protein sequence
MSNFPQAGQP APDFSTPDQN GNLVSLNDFH GQWVVIYFYP KDDTPGCTTE AKDFTGLHEE 
FHRLGAKILG VSPDSGKAHC KFIDKHNLSI TLLSDPEHQL IEAYGAWRLK KFMGKEYMGV
ARSTFLISTD GIIAYTWPNV KTKGHAQAVL NKLQELTNS