Gene Ava_0414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0414 
Symbol 
ID3682633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp532624 
End bp534003 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content47% 
IMG OID637715743 
Productnicotinate phosphoribosyltransferase 
Protein accessionYP_320935 
Protein GI75906639 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1488] Nicotinic acid phosphoribosyltransferase 
TIGRFAM ID[TIGR01513] putative nicotinate phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0342304 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACTA TCCCCATCTG GGATGTTCAG CCAACCCCAG AACTAAACAT CTCTGCGGCT 
GATTACAGCC TACTTACCGA TCTTTATCAG CTGACAATGG CTGCTTGTTA TACAGGTGAA
GGCGTAGAAC AACGACGGGC TAGCTTTGAG TTATTTGTGC GGCGATCGCC AGAGGGTTTT
GGCTATTTAA TTGCGATGGG ACTGACGCAA GCACTGGAAT ATTTAGAAAA GTTAAGTTTT
AGCTCGGAAC AGATAGCAGC ATTACAAGCC ACAGGCATTT TCGCTCATGC AGGGGAAGGC
TTTTGGTCAT TGCTAGCAGA GGCGCGATTT ACTGGGGATG TGTGGGCAGT ACCAGAAGGG
ACAGCCGTAT TTGCTAACGA GCCACTGTTA CGGGTAGAAG CACCGTTATG GCAAGCACAG
TTAGTAGAAA CTTACTTATT AAATACACTC AATTACCAAA CCTTAGTAGC CACAAGAGCA
GCACGTCTAC GTGATATAGC TGGTGAGCAA GCAACACTTT TGGAATTTGG TACAAGACGG
GCTTTTAGCC CCCAAGCCTC TTTGTGGGCA GCACGGGCAG CTTTAGCGGG TGGTTTAGAT
GCCACCTCCA ATGTGTTAGC AGCGCTACAA CTGGGACAAC AGCCAAGTGG TACGATGGCT
CACGCCTTGG TTATGGCGTT GTCGGCGATG GAAGGTAGTG AAGAACAAGC CTTTAGTGCG
TTTCATCGCT ATTTTCCCGG TGCGCCATTG TTAATTGATA CTTATGATAC TGTTGCGGCT
GCTCAGCACT TAGCAGAAAA AGTGAATACC GGAAAAATGG AATTATCCGG TGTCAGGTTA
GATTCTGGTG ACTTAGTGAG TTTATCAAAA CAAGTGCGAT CGCTCCTGCC GAAAGTATCG
ATTTTTGCCA GTGGCGACTT AGATGAATGG GAAATTGCCA AACTCCAAGC AGCCGGCGCA
GAAATCGACG GCTACGGACT AGGAACCAAG CTAGTTACAG GTTCCCCCGT GAATGGAGTT
TACAAACTCG TAGAAATTGA CGATATCCCA GTGATGAAAA AGTCCAGTGG TAAAGCAACA
TACCCAGGTC GTAAGCAAAT TTTTCGTTCC TATGGGGGAG GTCAGGTTCA AGCAGACAGA
TTGGGGTTAA TCACAGATAC ACCCTTAATT ACAGAAAAAC CTTTGTTGCA ATTGGTAGTT
AAAGAAGGTC AACGCCTACA ACCCCCAGAA AAGCTGTCCG CAATTCGCCA ACGCACCGCC
GCTTCTGTCG CCAGTTTACC CGAACAAACA AAGCGTTTAG ATAATCCCGT TCCCATACCC
ATAGAAATTT CCACTGCACT GCAAAATTTG ACAGAAGTTA CATTGCAACG TCTCAACTAA
 
Protein sequence
MTTIPIWDVQ PTPELNISAA DYSLLTDLYQ LTMAACYTGE GVEQRRASFE LFVRRSPEGF 
GYLIAMGLTQ ALEYLEKLSF SSEQIAALQA TGIFAHAGEG FWSLLAEARF TGDVWAVPEG
TAVFANEPLL RVEAPLWQAQ LVETYLLNTL NYQTLVATRA ARLRDIAGEQ ATLLEFGTRR
AFSPQASLWA ARAALAGGLD ATSNVLAALQ LGQQPSGTMA HALVMALSAM EGSEEQAFSA
FHRYFPGAPL LIDTYDTVAA AQHLAEKVNT GKMELSGVRL DSGDLVSLSK QVRSLLPKVS
IFASGDLDEW EIAKLQAAGA EIDGYGLGTK LVTGSPVNGV YKLVEIDDIP VMKKSSGKAT
YPGRKQIFRS YGGGQVQADR LGLITDTPLI TEKPLLQLVV KEGQRLQPPE KLSAIRQRTA
ASVASLPEQT KRLDNPVPIP IEISTALQNL TEVTLQRLN