| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0362 |
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| Symbol | |
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| ID | 3682736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 467060 |
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| End bp | 470614 |
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| Gene Length | 3555 bp |
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| Protein Length | 1184 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637715690 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_320883 |
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| Protein GI | 75906587 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.656273 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGGG ACACCACAGG TAAGTTTGTT AGCAATTGGG ATTCGGAACC GAAACACAGA
TATAGTGTGT CTCTTACCAG TACAGCATGG CGATCGCTTG ATGAGGAAGC ACACAAGCAG
GGAATTTCTC GTTCGGAATT GATTGAACAT TTTGCTCGTC ACTTGGGAAG TGAGCAGAAT
CTCACGGATG AGGTAATTAG CGTAAATGCT GGAAATGCCG AACAGCAACC AATATTAGCT
ACAGTCTTTA ATCAAGACAT CAATAACCAT CAGCAACTCC AACTCGTCAC ATCTCCAGAA
ACTGAGTGCC AAGTCACAAC GATTCTGGAA AGCATTACCG ATGCTTTTGT CGCCTTTGAT
GAAAATTGGC ACTACACCTA TGTGAATCAG GCGGCGGTGA AAATTCTGCA CAAAACGCCA
GTAGAACTCA TTGGTAAACA CGTTTGGGAT GAAGTTTTTC CAGAACTTGT AGGTGGTGTG
GCTTACCAAG AACTACACCG GGCTGTAGCC GAACAAGTTG CTGTGTCTTG GGAAGAATTT
GGGGAATCTG TTCAATGTTG TTTAGAGGCT AATGCTTATC CCTTTGCTCA GGGTGTGGCG
GTTTATTTCC GCGATATCAC AGAACGCAAA AAAGCTGAAG CAGAGAGAGA ACGTTTGCTC
CATGAACTGG AAACTGAACG CACTCGGTTT GAAGCGGTCT TGCGACAAAT GCCAGCTGGG
GTGATGATTG CTGATGCAGA TTCAGGTAAG TTAGTTCTTA CTAATGAACA AGCCAAACAG
ATTCTGAGGT ACAACTTTGA AGATTCATTA GAGCTGGAAG AATACGTACC AGTAACTCCC
TTTGCCGCCT TTCGCTGTGA TGGACAGCCG TACACTCCTT ATGAGTACCC ACTGCCCCGA
TCGCTGTTGA CTGGTGAAGT GATTTCTCAG GAGGAAATGC TGTTACGCTG GGAAGATAAC
AGCCATATTT TCATCAGCGT TAACTCAGCG CCTATTTTAA ATAGTCAGGG GCAAATTGTA
GCAGCTGCGA TCGTTTTTCA GGATATCACC GAACGTAAAC GCTTAGAATC AGAACTGCAA
CAGCGTGAGC AAGAATTCAA GATGGTGGCG GAAAATGCCC CCGATATTAT TAGCCGCGTT
GATAGAGAAT TTCGCCATCT TTATGTCAGC CCTGCCGTAG AAGCAGCTAC AGGTATTCCA
CCAGAGGTAT TTATTGGTAA AACTAATACC GAATTAGGAA TGCCAGAGGA AATCTGCACT
TTTTGGCATG AAAATCTACA GCGAGCCTTT GACACAGGTC AAAAACAAGT TGTGGAATTT
AGTTTTCCCA CCCCAACAGG TCTTCGCTGG TATCAATCCC ATCTCGCCCC AGAATTTGCT
AGTGATGGTT CTGCGACAAC GCTAGTAAAT ATTGCTCGTG ATGTCACAGA CTACAAACGA
ATCGAACAGG CGCTACTAGA TAATGAAGAA CGCTTACGAT TAGCGTTAAC GGTGGCACAA
GCTGCACAAC GGCAACTAGC AACAATTTTT GAAACCTCGC CGGTGGGAAT TGCCCTGTTA
GATAGCCAGC AGCGATTTGT TGCCATTAAT CAAGCCTTAG CCCAAATTAA CGGACTCACC
CGCCAAGAAC ACTTGGGACG TTCAATTACC GAACTTTTTG GTGAATCAGA TCCCCAAGTA
GTCCAAGTCT TTCATGACAT TTACACTACA GGTGAACCTT TTATTTCACC TAGCTTCGCT
GTCAACTTAC CTGGACGCAG CGATCGCCAA CCTGGTTACT ATAATGTCTA CTATCTGCCC
ACAACCAACT CAAATCATCA AGTGGAAGAT GTTTTAGTTT ACGTGTTGGA TGTGACAGAA
CAAGTACGAT TAGAGCGTGG TCTACGCTTT CTTTCGGAAA CAAGTAAAGT TTTGGCTTCT
TCCCTCGATT ATCAAACCAC CTTAGAACGC TTGGCACAAC TGGCAGTGCC AGAGTTAGCT
GATTGGTGTA CAGTCCACAT GGTGGCAGAA AATGGTTCTG TTGAGGAGAT TGCGGTGGCT
CATGTTGACC CAGCTAAACT AGCATGGGCA GAGGAAATCC GACGCAAATA TCCTCTAAAT
TTGAATGATC CGAGAGGGGC TGCATTAACA TTGCGAACTG GTCAATCAGA TTTATTAATC
GATATTCCCG ATGAATTACT TGTACAAGCG GCCCGTGACC CAGAACACTT AGAAATTTTG
CGGCAAGTTG GGTTTAAATC TGCAATGACA GTACCACTCA GAACCCAAAC ACGGACTCTC
GGCGTGATTT CCTTTATCTG TGCCGAATCT GGTCATAAAT ATGACCAAAG CAGTATGCAG
CTAGCAGAAG AACTGGCTTA CCGCGCTTCC TTAGCAATTG ATAATGCCCA CTTGTATCGG
TTAGCTCAAA GCGATCGCAC CAAGGCAGAA GCAGCCAACC GCATCAAAGA CGAATTTCTT
GCTGTACTGT CCCATGAATT GCGATCGCCT CTCAATCCCA TTCTGGGGTG GTCAAGAATC
CTCAGAACTA AGCAGCTATC CCCCACAAAA GTTGACCAAG CCCTAGAAAC TATCGAACGC
AACGCCAAGC TACAAGCCCA ACTAATTGAG GATTTATTAG ACGTTTCCCG CATCCTCCAA
GGAAAAATGA CCTTGAATGT TGCCCCGGTT AATTTAGCCG CCACCATTAC AGCCGCCTTG
GAAACTGTAC AACTGGCCGC AGAAGCTAAG AACATTCACA TTCAGACCAC ACTCAAACCC
ATTGCTGGCA ATGTTGTCGG CGATCAGAAC CGCTTGCAAC AGGTCATCTG GAATCTCCTT
TCCAACGCTG TCAAATTTAC ACCCTCTGGT GGACAAATTG AGGTGCAATT GGCACAGGTG
AATCTTTATG CCCAAATTCA AGTTAAAGAT AGTGGTAAAG GAATTGCACG GGAGTTTCTG
CCTTATGTGT TTGAATATTT CCGTCAAGAA GATGGGGCGA CAACCCGAAA ATTCGGTGGG
CTAGGATTAG GGCTGGCGAT CGTCCGCCAT TTCACCGAAC TGCATGGGGG AACAGTCCAT
GTGAGTAGTC TAGGACAAGA TTTAGGCGCA ACATTCACCG TCCGCCTACC ATTAAATCTG
GTCGAGCAAG AGTTACCTGC TGATGACGAG CAATTAAAAA AGGTGACAGA CCTCACAGGC
ACCCATATAT TAGTTGTGGA CGACGATGCA GATATGCGGG AATTAGCCGA ATTTATCCTG
ATACAATTTG GCGCACAAGT AACAACAGCC GCCTCAGCAG TAGAAGCGTT GAATATTTTC
AGCCACTTCA TCCCCGATTT GCTGTTATGT GATATCGGTA TGCCAGAAAT GGACGGCTAT
TCTCTGATGC GGCAAATTAG ACAATGGTTG CCCCATGAGG GAGGTACAAT ACCAGCGATC
GCCCTAACCG CTTATGCAGG GGAAATCAAC CAACAACAAG CTTTAGCCGC CGGATTTCAC
CAGCATATTT CCAAACCCGT GGAACCAGAG GAGTTAGTGC AGACAATTTT TCAACTACTC
CACCCCGTTC AGTAA
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| Protein sequence | MKRDTTGKFV SNWDSEPKHR YSVSLTSTAW RSLDEEAHKQ GISRSELIEH FARHLGSEQN
LTDEVISVNA GNAEQQPILA TVFNQDINNH QQLQLVTSPE TECQVTTILE SITDAFVAFD
ENWHYTYVNQ AAVKILHKTP VELIGKHVWD EVFPELVGGV AYQELHRAVA EQVAVSWEEF
GESVQCCLEA NAYPFAQGVA VYFRDITERK KAEAERERLL HELETERTRF EAVLRQMPAG
VMIADADSGK LVLTNEQAKQ ILRYNFEDSL ELEEYVPVTP FAAFRCDGQP YTPYEYPLPR
SLLTGEVISQ EEMLLRWEDN SHIFISVNSA PILNSQGQIV AAAIVFQDIT ERKRLESELQ
QREQEFKMVA ENAPDIISRV DREFRHLYVS PAVEAATGIP PEVFIGKTNT ELGMPEEICT
FWHENLQRAF DTGQKQVVEF SFPTPTGLRW YQSHLAPEFA SDGSATTLVN IARDVTDYKR
IEQALLDNEE RLRLALTVAQ AAQRQLATIF ETSPVGIALL DSQQRFVAIN QALAQINGLT
RQEHLGRSIT ELFGESDPQV VQVFHDIYTT GEPFISPSFA VNLPGRSDRQ PGYYNVYYLP
TTNSNHQVED VLVYVLDVTE QVRLERGLRF LSETSKVLAS SLDYQTTLER LAQLAVPELA
DWCTVHMVAE NGSVEEIAVA HVDPAKLAWA EEIRRKYPLN LNDPRGAALT LRTGQSDLLI
DIPDELLVQA ARDPEHLEIL RQVGFKSAMT VPLRTQTRTL GVISFICAES GHKYDQSSMQ
LAEELAYRAS LAIDNAHLYR LAQSDRTKAE AANRIKDEFL AVLSHELRSP LNPILGWSRI
LRTKQLSPTK VDQALETIER NAKLQAQLIE DLLDVSRILQ GKMTLNVAPV NLAATITAAL
ETVQLAAEAK NIHIQTTLKP IAGNVVGDQN RLQQVIWNLL SNAVKFTPSG GQIEVQLAQV
NLYAQIQVKD SGKGIAREFL PYVFEYFRQE DGATTRKFGG LGLGLAIVRH FTELHGGTVH
VSSLGQDLGA TFTVRLPLNL VEQELPADDE QLKKVTDLTG THILVVDDDA DMRELAEFIL
IQFGAQVTTA ASAVEALNIF SHFIPDLLLC DIGMPEMDGY SLMRQIRQWL PHEGGTIPAI
ALTAYAGEIN QQQALAAGFH QHISKPVEPE ELVQTIFQLL HPVQ
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