| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0345 |
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| Symbol | |
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| ID | 3682778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 442979 |
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| End bp | 443509 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637715673 |
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| Product | general secretion pathway protein H |
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| Protein accession | YP_320866 |
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| Protein GI | 75906570 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0177644 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0749297 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTCAAGC CAGAATTGCA AGCTAAATTC CTCAGCCACC TCAGCAACCG TAAGAACAGA
GAAGAAGAAG GTTTTACCTT AATTGAATTG CTAGTTGTAG TAATTATTAT CGGTGTACTT
GCGGCGATCG CGTTACCTTC GCTACTTGGA CAGGTAAACA AAGCCAAACA GTCAGAAGCG
AGAAACTACG TAGGTACAGT CAACCGTTCT CAACAAGCTT ACTACCTAGA ATACCAAAAG
TTTGCTACCA ACCTTGACGA ATTACAAGTA GGTATTAGAA CTCAATCTGA AAATTATCAG
TATACTATTG CTGGTGGTGG TACATCTGCG GCTCAATTCA AAGGAACAGC TTATAAAGCA
GCACTTAAAT CATACTATGG ATTAGTAGGT ACAACCCAAG GAAGCAGTGC TACCTCAGAA
GCCCTAACAC TAGCAATAGC CTGTGAGACA GCAGGACCTA GCCAATCTGT GGCTGATGTC
ACCACATTCG GTACAACGTG TGCAGCAAAT TTCGTCTCTT TGGCTAGATA A
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| Protein sequence | MLKPELQAKF LSHLSNRKNR EEEGFTLIEL LVVVIIIGVL AAIALPSLLG QVNKAKQSEA
RNYVGTVNRS QQAYYLEYQK FATNLDELQV GIRTQSENYQ YTIAGGGTSA AQFKGTAYKA
ALKSYYGLVG TTQGSSATSE ALTLAIACET AGPSQSVADV TTFGTTCAAN FVSLAR
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