Gene Ava_0339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0339 
Symbol 
ID3682772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp436810 
End bp437214 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content43% 
IMG OID637715667 
Product4Fe-4S ferredoxin, iron-sulfur binding 
Protein accessionYP_320860 
Protein GI75906564 
COG category[C] Energy production and conversion 
COG ID[COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.284381 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAAAAC GAGTTACCCT CACCTTTCCC AAACGTGCTA TACAAATGCC TGTGACTTAT 
GTGCTGGCGA AAGAGTTCAA TGTGGCTGCG AATATCATCC GCGCTCAAGT TGCGCCTAAT
CAAATTGGCA AACTGGTAGT GGAACTGTCA GGAGATATTG ATCAGTTAGA TGCAGCTATT
GAATGGATGC GATCGCGCCA TATTAATGTT TCTCTAACTT TAGGGGAAAT TGTTGTTGAT
GAAGATATAT GTGTCCACTG TGGTTTATGT ACTGGGGTTT GTCCTACAGA AGCCCTGACC
TTGCACCCAG AAACATATAA ATTAACATTC ACGCGATCGC GCTGCATTGT CTGTGAGCAG
TGTATTCCTA CTTGTCCTGT ACAAGCAATA TCTACGAATC TTTAA
 
Protein sequence
MKKRVTLTFP KRAIQMPVTY VLAKEFNVAA NIIRAQVAPN QIGKLVVELS GDIDQLDAAI 
EWMRSRHINV SLTLGEIVVD EDICVHCGLC TGVCPTEALT LHPETYKLTF TRSRCIVCEQ
CIPTCPVQAI STNL