Gene Ava_0330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0330 
Symbol 
ID3682763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp427954 
End bp429306 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content45% 
IMG OID637715658 
ProductDnaB helicase 
Protein accessionYP_320851 
Protein GI75906555 
COG category[L] Replication, recombination and repair 
COG ID[COG0305] Replicative DNA helicase 
TIGRFAM ID[TIGR00665] replicative DNA helicase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.850269 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.345432 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAG AATTGAGCTT TCAAGGCGAC GGTAGTAACC GCCTTCCACC CCAAAACATC 
GAGGCAGAAG AAGCAATTTT AGGGGGCATT CTACTAGATC CAGAAGCGAT TGGTCGAGTA
AGCGAAGTCC TGATTACCGA AGCTTTTTAT ATTAGCGCCC ACAGGGATAT CTATCAAGCC
GCATTGCGTC TCCACGGCCA AGGTAAACCC ACAGATTTGC TGTCAGTCAC AAGTTGGCTC
ACTGATAATG ACTTACTGAC CCGCATAGGT GGTAGAAACA AATTAGCCAC CTTGGTAGAC
CGCACAGTCT CAGCTGTGAA TATCGATGCC TTAGCAGGGT TAGTGATGGA AAAATACCTG
CGACGGCAAT TAATTAAAGC TGGCAATGAA ATTGTCCATC TCGGTTACGA GACAGAAAAA
GAATTACCCA TAGTACTAGA CCAAGCAGAA CAGAAAGTTT TTGGCGTTAC TCAAGAACGA
CCCCAATCAG GCTTAGTTCA CATCGCAGAC ACCCTAATTA ATAACTTCCA AGAAATTGAG
GAGCGCAATC AAGGCATTGC TTTACCTGGT ATTCCCTGCG GCTTTTATGA TTTAGATGCG
ATGACTAGTG GCTTTCAGCG TTCTGATTTA ATCATCGTCG CTGGCAGGCC ATCAATGGGG
AAAACAGCAT TTTGTTTGAA CCTAGCTAAT AATATCGCTG CTTCCATGAA GCTACCTGTT
GCTGTTTTCA GTTTAGAAAT GTCGAAAGAG CAGCTGGTAC AACGTCTACT GGCTAGTGAA
GCCCAAATCG AAAGTGGCTA TCTGCGGAGT GGTCGCCTCA GTCAAACACA ATGGGAACCA
TTAAGCCGGG CGATTAGTAT GCTGTCTGAA ATGCCCATTT TTATTGATGA CACGCCGAAT
ATTACCGTCA CCCAAATGCG CTCTCAAGCT AGAAGATTAC AAGCCGAACA AGGTGTAGAA
CTGGGTTTGA TAGTGATAGA TTACCTGCAA TTAATGGAAG GAGGCGGAGA TAATCGCGTC
CAAGAGTTAT CTAAAATTAC CCGTTCTCTC AAAGGTTTAG CTAGAGAATT ATCCGTACCT
GTAATAGCTC TGTCTCAGCT AAGTCGTGGC GTAGAAGCAC GCACCAACAA GCGTCCTATG
TTGTCTGATT TACGTGAAAG CGGCTCCATT GAGCAGGATG CGGATTTAGT TATTATGTTA
TACCGTGATG ATTACTATAA CAGCGACACC CCCGATCGCG GCCTAGCGGA AGTAATTATA
GCGAAACATC GCAACGGCCC AACAGGTACA GTAAAACTCC TATTTGACCC ACAGTTTACC
AAATTTAAAA ACTTAGCCAG ATCGGGCTAT TAA
 
Protein sequence
MAEELSFQGD GSNRLPPQNI EAEEAILGGI LLDPEAIGRV SEVLITEAFY ISAHRDIYQA 
ALRLHGQGKP TDLLSVTSWL TDNDLLTRIG GRNKLATLVD RTVSAVNIDA LAGLVMEKYL
RRQLIKAGNE IVHLGYETEK ELPIVLDQAE QKVFGVTQER PQSGLVHIAD TLINNFQEIE
ERNQGIALPG IPCGFYDLDA MTSGFQRSDL IIVAGRPSMG KTAFCLNLAN NIAASMKLPV
AVFSLEMSKE QLVQRLLASE AQIESGYLRS GRLSQTQWEP LSRAISMLSE MPIFIDDTPN
ITVTQMRSQA RRLQAEQGVE LGLIVIDYLQ LMEGGGDNRV QELSKITRSL KGLARELSVP
VIALSQLSRG VEARTNKRPM LSDLRESGSI EQDADLVIML YRDDYYNSDT PDRGLAEVII
AKHRNGPTGT VKLLFDPQFT KFKNLARSGY