Gene Ava_0318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0318 
Symbol 
ID3682790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp414272 
End bp416050 
Gene Length1779 bp 
Protein Length592 aa 
Translation table11 
GC content43% 
IMG OID637715646 
Producthypothetical protein 
Protein accessionYP_320839 
Protein GI75906543 
COG category[R] General function prediction only 
COG ID[COG0661] Predicted unusual protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0340511 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGGGTCA ACACACTAAA GGACACTGTA AATTTCCCAG AAGAAGAGGC AGACAAAGGC 
GTGGGTCAGT ATCAACCTGG TCAGCTAAAG CGCTACAATC CCGATGCGAT CGCTCGTTAC
TATCGTTTTC GTCCCTGGCT AGCATGGGGA CGGCTATTCA AAATAACTTG GTCTTTTGCC
ATGTTTGTTT TGGGTTTGAA GTGGGATGAA TGGCAAAATC AAGTAGAGCA GAACAAGGGA
AAACGAGCTA CCCAGTTGCG ACAACTACTT ACCCGTTTAG GTCCTACTTT TATTAAGGTT
GGTCAGGCTC TCTCCACTAG ACCAGACCTC ATACGTAAGG ATTTCCTAGA AGAACTCATC
AAGCTGCAAG ACCAATTGCC AGCTTTTGAT AATGCGATCG CTTATCACAT TATTGAATCT
GAGTTAGATA GACCCATCTC AGAAGTATAT AGCGAACTCT CCCCTGCTCC CATTGCCGCC
GCTAGTTTGG GTCAAGTCTA TCGGGGACGT TTAATTAGTG GTGAGGAAGT CGCGGTCAAA
GTACAGCGCC CTCATCTGCG TCCTACCCTC ACCCTCGACC TTTATTTGAT GCGTTGGGCT
GCTAGTTGGT TAGCGCCTTG GCTACCACTC AACCTTGGTC ATGACTTAAC TTTGATTGTG
GATGAGTTTG GTATCAAGTT ATTTGAAGAA ATCGATTACT TGAATGAAGG TCGCAACGCC
GAAAAATTTG CTCACAACTT CCGTAATGAT TCCCAAGTAA AAGTACCGAG TATCTATTGG
CGCTTTACTA CCAGTCGGGT TTTAACTTTA GAGTGGATTA ATGGTTTCAA GCTCACAGAT
ACTGAAAGTA TTCGCAAAGC TGGTTTAGAC CCAGAAGCGA TTATCAGTAT TGGTGTCACC
TCAGGCTTGC AGCAGTTGTT GGAATATGGC TTTTTCCACG CAGATCCCCA TCCAGGTAAT
TTATTTGCCA TGCCTGACGG TCGTATGGCT TATATTGACT TTGGCATGAT GGATCAGTTG
GAAGAAAAGA GTAAAGAAAG TTTGGTAGAT GCACTAGTGC ATCTAGTCAA CAAAGACTAT
AGTGATTTAG CCTTAGATTT TGTCAATTTA GGCTTTCTGA CTCCAGATAC TAATATTGTT
CCTATCATTC CGGCATTGGA AACAGTATTA GGAAATGCCA TTGGTAAAAA TGTCAGCGAT
TTTAACTTTA AAACCATCAC AGATCAGTTC TCGGAACTGA TGTATGAGTA TCCATTCCGA
GTTCCTGCCA AGTTTGCTTT AATTATTCGC TCTCTCGTGA CACAAGAAGG GATTGCTTTG
AGCCTTAATC CCAATTTCAA AATTGTGGAT GTGGGTTATC CTTACGTAGC CAGACGGTTA
CTAACTGGAG AATCACCCGA ATTAAGAAGG CGGTTGCTGA ATGTGCTATT CAAAGATGGT
AGATTTCAGT GGCAACGCTT GGAGAATTTG ATTGCGATCG CTCGCAGTGA TAACAATTTT
GATGTGTTAC CCACAGCCAG AATGGGTTTG CAATTTCTCT TGTCTGATGA AGGTCAATTT
CTCCGCCGCC AGTTGGTGTT AGCACTTACA GAAGATGACC GCTTGCACAC AGAAGAAGTT
CAACGCCTGT GGTCTTTGGT GAAAGATGAC CTCCAACCAA ATCGCATATT AAATGTGGCG
ATCGGTTTGC TCACAGATTT ATCTAGAGAA GGTGTTGCCG CTATTTTACC TAAGGCAACT
TCTTTTGGAT TTTTTGATGA AGCCCAATCA AAAAATTAA
 
Protein sequence
MRVNTLKDTV NFPEEEADKG VGQYQPGQLK RYNPDAIARY YRFRPWLAWG RLFKITWSFA 
MFVLGLKWDE WQNQVEQNKG KRATQLRQLL TRLGPTFIKV GQALSTRPDL IRKDFLEELI
KLQDQLPAFD NAIAYHIIES ELDRPISEVY SELSPAPIAA ASLGQVYRGR LISGEEVAVK
VQRPHLRPTL TLDLYLMRWA ASWLAPWLPL NLGHDLTLIV DEFGIKLFEE IDYLNEGRNA
EKFAHNFRND SQVKVPSIYW RFTTSRVLTL EWINGFKLTD TESIRKAGLD PEAIISIGVT
SGLQQLLEYG FFHADPHPGN LFAMPDGRMA YIDFGMMDQL EEKSKESLVD ALVHLVNKDY
SDLALDFVNL GFLTPDTNIV PIIPALETVL GNAIGKNVSD FNFKTITDQF SELMYEYPFR
VPAKFALIIR SLVTQEGIAL SLNPNFKIVD VGYPYVARRL LTGESPELRR RLLNVLFKDG
RFQWQRLENL IAIARSDNNF DVLPTARMGL QFLLSDEGQF LRRQLVLALT EDDRLHTEEV
QRLWSLVKDD LQPNRILNVA IGLLTDLSRE GVAAILPKAT SFGFFDEAQS KN