| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0313 |
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| Symbol | ligA |
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| ID | 3682785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 401525 |
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| End bp | 403555 |
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| Gene Length | 2031 bp |
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| Protein Length | 676 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637715641 |
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| Product | NAD-dependent DNA ligase LigA |
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| Protein accession | YP_320834 |
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| Protein GI | 75906538 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTACAAA CTCACTCTGA AGTCAAACGC GTAGAAGAAC TACGTCGGTT GTTGCAACAA
GCTAGTTATG CTTATTATGT CTTGGATGCA CCCGTCATGG AGGATGCAGT TTATGACCAA
CTGTATCGGG AACTGCAACA ACTAGAAATT CAGCATCCAG AATTAGTTAC ACCAGATAGT
CCGACACAGC GCATCGGGGA AAGACCAGCG ACACAGTTTC TCTCTGTGCG CCACAATATT
CCCCTCTACA GTCTGGAGAA TGCCTTTAAT GTAGAAGAGT TGCAAGCTTG GGATCAACGT
TGGCGGCGAC AAGTAGCACC AACAGAGGCG GAATATGTGG CGGAACTGAA AATTGATGGT
TCGGCGATCG CTCTCACTTA CGAAAATGGT ATTTTAGTCA GGGGTGCAAC TAGGGGTGAT
GGGGTGACAG GGGAAGATAT CACCCAAAAT GTCCGCACTA TTCGCTCCAT TCCCTTGCGG
TTAAGTTTTG ACGGTATAGA AAATATTGGC AAGGTGGAAG TTAGGGGCGA GGCTTTCTTA
CCTCTGGAAG TGTTTAAACA AATCAACGAA GAACGACAAA AAGCCGGAGA ACAGTTATTT
GCTAATCCGC GCAATGCGGC GGCTGGTACA CTCAGACAGC TAGATTCAAA GATTGTGGCG
CGACGACGGT TAGACTTTTT CGCCTATACC CTGCATATTT CGGGGATGGA TGACGCGAGT
ATTGCCAATA CCCAATGGGA AGCCTTGGAG TTGTTGCAAA AAATGGGTTT TCGGGTGAAT
TCCCAGCATC AACTTTGCCA GTCGCTCGCA GAAGTTGCCG ATTATTATAG ATATTGGGAT
ACGGAAAGAT TAAATTTGCC CTACATGACC GATGGGGTAG TATTAAAACT CAATTCCTTT
AAACTACAAG AACAGTTAGG TTTTACCCAA AGATTTCCCC GATGGGCAGT GGCGTTGAAG
TATCCCGCCG AAGAAGCACC CACCCGTGTA GAAAATATTG CGGTGAATGT GGGGAGGACG
GGGGCGTTAA CACCATTGGC TCAAATGCGC CCGGTGCAGT TGGCGGGAAC TACTGTGTCT
AGGGCTACTT TACATAATAG CGATCGCATC GCTCAATTAG ACATCCGCAT CGGTGATACT
GTCATTGTCC GCAAAGCCGG GGAAATCATC CCCGAAGTTG TCAGGGTACT CAAAGAATTG
CGCCCGGTTG ACACCCAACC ATTTATTATG CCTACTCATT GTCCTGTCTG CGGACAGCCT
GTGGTGCGGG AGACAGGGGA AGCGGTGACT CGTTGTGTGA ATGCTTCCTG TGCGGCGATT
CTTAAAGGCT CAATTGAACA CTGGGTGAGT CGTGATGCTT TAGATATTAA AGGTGTGGGG
GAAAAACTTG TACATCAGCT TGTCGATAAA GAATTGGTGC ATTCCGTTGC CGACTTATAT
AGTTTGACAA ACGAACAATT ATTTGTATTG GAAAGAATGG GAGAAAAATC GGCACAGAAA
TTAATTGAGG CGATCGCTCA ATCAAAAAAT CAGCCTTGGT CACGAGTACT ATATGGTTTG
GGCATTCGTC ATGTGGGTAG TGTCAATGCC CAATTATTGA GTGAAAAGTA TCGCGCAGTC
GCAGAATTAT CGTCTGCCAA GCAGTCAGAT ATTGCAGGTA TTTATGGCAT AGGTGCTGAA
ATTGCCCAAT CTGTTTACCA GTGGTTTCGG ATTAGTGCCA ATCAACGTTT AATTGAGCGT
TTGCAAGCAG CAGGGTTACA ATTTGCAAAC ACTGAAGAAA TATCAGCCGT CGATAATGCT
AACCTCAAAT TGGTGGGTAA GACCTTTGTC ATTACAGGGA CTTTACCTAC CTTAAAACGA
GATGAAGCTA AGGCTTTAAT TCAAAAAGCT GGGGGAAAAA TAACGGAATC AGTTAGTAAG
AAAACAGATT ATTTAGTTGT GGGTGAAGAT GCAGGTTCTA AGTTAGAAAA AGCGCAAACT
TTAGGAATTA AACAGTTAAG TGAAGCTGAA TTACTGAAAA TTTTAGCTTA A
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| Protein sequence | MVQTHSEVKR VEELRRLLQQ ASYAYYVLDA PVMEDAVYDQ LYRELQQLEI QHPELVTPDS
PTQRIGERPA TQFLSVRHNI PLYSLENAFN VEELQAWDQR WRRQVAPTEA EYVAELKIDG
SAIALTYENG ILVRGATRGD GVTGEDITQN VRTIRSIPLR LSFDGIENIG KVEVRGEAFL
PLEVFKQINE ERQKAGEQLF ANPRNAAAGT LRQLDSKIVA RRRLDFFAYT LHISGMDDAS
IANTQWEALE LLQKMGFRVN SQHQLCQSLA EVADYYRYWD TERLNLPYMT DGVVLKLNSF
KLQEQLGFTQ RFPRWAVALK YPAEEAPTRV ENIAVNVGRT GALTPLAQMR PVQLAGTTVS
RATLHNSDRI AQLDIRIGDT VIVRKAGEII PEVVRVLKEL RPVDTQPFIM PTHCPVCGQP
VVRETGEAVT RCVNASCAAI LKGSIEHWVS RDALDIKGVG EKLVHQLVDK ELVHSVADLY
SLTNEQLFVL ERMGEKSAQK LIEAIAQSKN QPWSRVLYGL GIRHVGSVNA QLLSEKYRAV
AELSSAKQSD IAGIYGIGAE IAQSVYQWFR ISANQRLIER LQAAGLQFAN TEEISAVDNA
NLKLVGKTFV ITGTLPTLKR DEAKALIQKA GGKITESVSK KTDYLVVGED AGSKLEKAQT
LGIKQLSEAE LLKILA
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